Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Exome QC workflow
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https://github.com/apaul7/cancer-genomics-workflow.git
Path: definitions/subworkflows/qc_exome.cwl Branch/Commit ID: low-vaf |
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record-in-secondaryFiles-wf.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/record-in-secondaryFiles-wf.cwl Branch/Commit ID: main |
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count-lines9-wf-noET.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/count-lines9-wf-noET.cwl Branch/Commit ID: master |
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super-enhancer.cwl
Both `islands_file` and `islands_control_file` should be produced by the same cwl tool (iaintersect.cwl or macs2-callpeak-biowardrobe-only.cwl) |
https://github.com/Barski-lab/workflows.git
Path: workflows/super-enhancer.cwl Branch/Commit ID: master |
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forome_vcf_upload_archive.cwl
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https://github.com/ForomePlatform/vcf-upload-cwl-pipeline.git
Path: forome_vcf_upload_archive.cwl Branch/Commit ID: main |
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rhapsody_targeted_1.9-beta.cwl#SplitAndSubsample.cwl
SplitAndSubsample splits, subsamples and formats read files to be deposited in QualityFilter. |
https://github.com/longbow0/cwl.git
Path: v1.9-beta/rhapsody_targeted_1.9-beta.cwl Branch/Commit ID: master Packed ID: SplitAndSubsample.cwl |
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Whole_Exome-Seq.cwl
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https://github.com/athenarc/whole-exome-seq.git
Path: workflows/Whole_Exome-Seq.cwl Branch/Commit ID: main |
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ConcordanceTestWorkflow.cwl
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https://github.com/DataBiosphere/topmed-workflows.git
Path: vcf-comparator/ConcordanceTestWorkflow.cwl Branch/Commit ID: 1.30.0 |
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processing.cwl
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https://github.com/hubmapconsortium/spatial-transcriptomics-pipeline.git
Path: steps/processing.cwl Branch/Commit ID: master |
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EMG QC workflow, (paired end version). Benchmarking with MG-RAST expt.
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/emg-qc-single.cwl Branch/Commit ID: master |
