Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	animal-genome-assembly.with_canu.cwl Animal Genome Assembly pipeline by Kazuharu Arakawa (@gaou_ak), CWLized by Tazro Ohta (@inutano). This workflow contains assembly step by canu which may take a few weeks to complete. Be careful to run!	https://github.com/pitagora-network/DAT2-cwl.git Path: workflow/animal-genome-assembly/animal-genome-assembly.with_canu.cwl Branch/Commit ID: main
	wf_clipseqcore_se_1barcode.cwl	https://github.com/yeolab/eclip.git Path: cwl/wf_clipseqcore_se_1barcode.cwl Branch/Commit ID: master
	pindel parallel workflow	https://github.com/mnneveau/cancer-genomics-workflow.git Path: pindel/workflow.cwl Branch/Commit ID: master
	downsample unaligned BAM and align	https://github.com/fgomez02/analysis-workflows.git Path: definitions/subworkflows/downsampled_alignment.cwl Branch/Commit ID: No_filters_detect_variants
	no-outputs-wf.cwl Workflow without outputs.	https://github.com/common-workflow-language/cwl-v1.2.git Path: tests/no-outputs-wf.cwl Branch/Commit ID: main
	04-quantification-se-revstranded.cwl RNA-seq 04 quantification	https://github.com/Duke-GCB/GGR-cwl.git Path: v1.0/RNA-seq_pipeline/04-quantification-se-revstranded.cwl Branch/Commit ID: master
	main-wes_chr21_test.cwl	https://github.com/bcbio/bcbio_validation_workflows.git Path: wes-agha-test/wes_chr21_test-workflow-gcp/main-wes_chr21_test.cwl Branch/Commit ID: master
	rnaseq_pipeline_fastq.cwl	https://github.com/FarahZKhan/cwl_workflows.git Path: topmed-workflows/TOPMed_RNAseq_pipeline/rnaseq_pipeline_fastq.cwl Branch/Commit ID: master
	snps_and_indels.cwl	https://github.com/mskcc/ACCESS-Pipeline.git Path: workflows/subworkflows/snps_and_indels.cwl Branch/Commit ID: master
	3stepWorkflow.cwl	https://github.com/giannisdoukas/CWLJNIKernel.git Path: tests/cwl/3stepWorkflow.cwl Branch/Commit ID: master

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