Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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extract_readgroup_fastq_se.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/extract_readgroup_fastq_se.cwl Branch/Commit ID: 17823fcd036d134df803fbf76e23b0bc5eabedfd |
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workflow-phmmer-blast.cwl
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https://github.com/ebi-wp/webservice-cwl.git
Path: workflows/workflow-phmmer-blast.cwl Branch/Commit ID: 40d46a0685a85895f597cbac7b147fd95d22c6a3 |
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preference-workflow.cwl
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https://github.com/duke-gcb/imads-worker.git
Path: predict_service/preference-workflow.cwl Branch/Commit ID: fffd8a4d1d3cf0045e66a3998dec70eb4e2cd003 |
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rna amplicon analysis for fastq files
RNAs - qc, preprocess, annotation, index, abundance |
https://github.com/MG-RAST/pipeline.git
Path: CWL/Workflows/amplicon-fastq.workflow.cwl Branch/Commit ID: 091374dc59a23966338638a668ae397d4ee20b2f |
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pcr-bottleneck-coef.cwl
ChIP-seq - map - PCR Bottleneck Coefficients |
https://github.com/alexbarrera/GGR-cwl.git
Path: v1.0/map/pcr-bottleneck-coef.cwl Branch/Commit ID: dd2241dbbbc23abd91b5e6a18c139530e7ef8d2b |
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scatter-valuefrom-wf6.cwl
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https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/scatter-valuefrom-wf6.cwl Branch/Commit ID: a062055fddcc7d7d9dbc53d28288e3ccb9a800d8 |
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pipeline-pe-blacklist-removal.cwl
ATAC-seq pipeline - reads: PE - with blacklist removal |
https://github.com/alexbarrera/GGR-cwl.git
Path: v1.0/ATAC-seq_pipeline/pipeline-pe-blacklist-removal.cwl Branch/Commit ID: 13826f526a99e151e9cf5f22e70bdcf4feea73f4 |
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extract_readgroups_bam.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/extract_readgroups_bam.cwl Branch/Commit ID: 0d3fdddeae5a398e476d91aa98766965866d8eae |
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bam to trimmed fastqs and HISAT alignments
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bam_to_trimmed_fastq_and_hisat_alignments.cwl Branch/Commit ID: 479c9b3e3fa32ec9c7cd4073cfbccc675fd254d9 |
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cluster_blastp_wnode and gpx_qdump combined
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https://github.com/ncbi/pgap.git
Path: task_types/tt_cluster_and_qdump.cwl Branch/Commit ID: 7edbf07405191db65a913e311a7f2260b076d36c |
