Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	revsort.cwl Reverse the lines in a document, then sort those lines.	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/revsort.cwl Branch/Commit ID: 8d8512061f2367c90aac67bcbf92af1061b4af59
	format-maf	https://github.com/mskcc/roslin-variant.git Path: setup/cwl/portal-formatting.cli/1.0.0/format-maf.cwl Branch/Commit ID: 08e592a521057cef4982c1d4111d2e3b30ea3f2f
	Varscan Workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/varscan_germline.cwl Branch/Commit ID: 479c9b3e3fa32ec9c7cd4073cfbccc675fd254d9
	04-quantification-se-unstranded.cwl RNA-seq 04 quantification	https://github.com/alexbarrera/GGR-cwl.git Path: v1.0/RNA-seq_pipeline/04-quantification-se-unstranded.cwl Branch/Commit ID: dd2241dbbbc23abd91b5e6a18c139530e7ef8d2b
	05-quantification.cwl ATAC-seq - Quantification	https://github.com/alexbarrera/GGR-cwl.git Path: v1.0/ATAC-seq_pipeline/05-quantification.cwl Branch/Commit ID: 13826f526a99e151e9cf5f22e70bdcf4feea73f4
	Immunotherapy Workflow	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/immuno.cwl Branch/Commit ID: a93be3183c2218ee50f13ae2675dd1cde563fdbc
	cluster_blastp_wnode and gpx_qdump combined	https://github.com/ncbi/pgap.git Path: task_types/tt_cluster_and_qdump.cwl Branch/Commit ID: f6950321e5c9ee733ad68a273d2ad8e802a6b982
	protein_extract	https://github.com/ncbi/pgap.git Path: progs/protein_extract.cwl Branch/Commit ID: 7edbf07405191db65a913e311a7f2260b076d36c
	umi duplex alignment fastq workflow	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/umi_duplex_alignment.cwl Branch/Commit ID: a93be3183c2218ee50f13ae2675dd1cde563fdbc
	exome alignment and germline variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/germline_exome.cwl Branch/Commit ID: ec5355f335852e51c6938809c16ea1d230a3f983