Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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ChIPseq_pipeline_spike_in.cwl
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https://github.com/CompEpigen/ChIPseq_workflows.git
Path: CWL/workflows/ChIPseq_pipeline_spike_in.cwl Branch/Commit ID: 50fc7f43e311be1a139031f54102b24ea40d55b0 |
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Generate genome index bowtie
Workflow makes indices for [bowtie](http://bowtie-bio.sourceforge.net/tutorial.shtml) v1.2.0 (12/30/2016). Executes `bowtie-index` to generate indices requires genome [FASTA](http://zhanglab.ccmb.med.umich.edu/FASTA/) file as input, returns results as a directory |
https://github.com/datirium/workflows.git
Path: workflows/bowtie-index.cwl Branch/Commit ID: 7518b100d8cbc80c8be32e9e939dfbb27d6b4361 |
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rnaseq-header.cwl
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https://github.com/datirium/workflows.git
Path: metadata/rnaseq-header.cwl Branch/Commit ID: 7518b100d8cbc80c8be32e9e939dfbb27d6b4361 |
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rnaseq-header.cwl
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https://github.com/datirium/workflows.git
Path: metadata/rnaseq-header.cwl Branch/Commit ID: d6ec0dee61ef65a110e10141bde1a79332a64ab0 |
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Detect Docm variants
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/docm_cle.cwl Branch/Commit ID: 0805e8e0d358136468e0a9f49e06005e41965adc |
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scatter-valuefrom-wf6.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/scatter-valuefrom-wf6.cwl Branch/Commit ID: ecdfe1ee769d05790f70ac87a711131f441f3753 |
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scatter-valuefrom-wf6.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/scatter-valuefrom-wf6.cwl Branch/Commit ID: e59538cd9899a88d7e31e0f259bc56734f604383 |
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echo-wf-default.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/echo-wf-default.cwl Branch/Commit ID: ecdfe1ee769d05790f70ac87a711131f441f3753 |
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Apply filters to VCF file
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/filter_vcf.cwl Branch/Commit ID: 18600518ce6539a2e29c1707392a4c5da5687fa3 |
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Creates a FastJ file for each gVCF by path
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https://github.com/curoverse/l7g.git
Path: cwl-version/convert2fastj/gvcf_version/cwl/tiling_convert2fastj_gvcf.cwl Branch/Commit ID: 720b557e4a822da8c6139a1143e2c8ceaf2102ff |
