Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Filter single sample sv vcf from paired read callers(Manta/Smoove)	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/sv_paired_read_caller_filter.cwl Branch/Commit ID: ef7f3345b352319ec22dffba26c79df033b141f9
	prefactor_calibrator.cwl	https://git.astron.nl/eosc/prefactor3-cwl.git Path: workflows/prefactor_calibrator.cwl Branch/Commit ID: fd7749331db2e416bf8d19083edec09ba7265690
	HBA_target.cwl	https://git.astron.nl/eosc/prefactor3-cwl.git Path: workflows/HBA_target.cwl Branch/Commit ID: fd7749331db2e416bf8d19083edec09ba7265690
	pindel parallel workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pindel.cwl Branch/Commit ID: ef7f3345b352319ec22dffba26c79df033b141f9
	bacterial_orthology	https://github.com/ncbi/pgap.git Path: bacterial_orthology/wf_bacterial_orthology.cwl Branch/Commit ID: 61eaea2f746c8a1fc2a2b731056b068e28ca4e20
	transcriptome_assemble.cwl	https://github.com/pitagora-network/DAT2-cwl.git Path: workflow/transcriptome_assemble/transcriptome_assemble.cwl Branch/Commit ID: c4dfeeb0872861e302834354446f14e298bce9b3
	phase VCF	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/phase_vcf.cwl Branch/Commit ID: 25eab0390f6866ce491b44c89d9e0435d228ab6f
	alignment for nonhuman with qc	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/alignment_wgs_nonhuman.cwl Branch/Commit ID: ef7f3345b352319ec22dffba26c79df033b141f9
	star-stringtie_wf_se.cwl	https://github.com/pitagora-network/pitagora-cwl.git Path: workflows/star-stringtie/single_end/star-stringtie_wf_se.cwl Branch/Commit ID: 14c76e15665ef0566eae5c2be75dba7feb74a50b
	picard_markduplicates Mark duplicates	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/cwl/subworkflows/picard_markduplicates.cwl Branch/Commit ID: 5230874e81911b6591cf859fe794f71f4eb8bb97