Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph Detect Variants workflow for WGS pipeline

https://github.com/tmooney/cancer-genomics-workflow.git

Path: definitions/pipelines/detect_variants_wgs.cwl

Branch/Commit ID: downsample_and_recall
workflow graph EMG pipeline v4.0 (paired end version)

https://github.com/proteinswebteam/ebi-metagenomics-cwl.git

Path: workflows/emg-pipeline-v4-paired.cwl

Branch/Commit ID: master
workflow graph exome alignment and somatic variant detection

https://github.com/genome/cancer-genomics-workflow.git

Path: somatic_exome_workflow.cwl

Branch/Commit ID: toil_compatibility
workflow graph module-4.cwl

https://github.com/andurill/ACCESS-Pipeline.git

Path: workflows/module-4.cwl

Branch/Commit ID: master
workflow graph ST520103.cwl

https://github.com/Marco-Salvi/cwl-ro-crate.git

Path: ST520103.cwl

Branch/Commit ID: main
workflow graph EMG core analysis for Illumina

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/emg-core-analysis-v4.cwl

Branch/Commit ID: 1b0851e
workflow graph wgs alignment and germline variant detection

https://github.com/tmooney/cancer-genomics-workflow.git

Path: definitions/pipelines/germline_wgs.cwl

Branch/Commit ID: downsample_and_recall
workflow graph 05-quantification-with-control.cwl

ChIP-seq - Quantification - samples: treatment and control

 https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/ChIP-seq_pipeline/05-quantification-with-control.cwl

Branch/Commit ID: master
workflow graph clustering.cwl

https://github.com/Epigenomics-Screw/Screw.git

Path: cwl/clustering.cwl

Branch/Commit ID: master
workflow graph bam to trimmed fastqs and biscuit alignments

https://github.com/tmooney/cancer-genomics-workflow.git

Path: definitions/subworkflows/bam_to_trimmed_fastq_and_biscuit_alignments.cwl

Branch/Commit ID: downsample_and_recall