Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph full_workflow_notcompact.cwl

https://github.com/teoloup/cwltools.git

Path: full_workflow_notcompact.cwl

Branch/Commit ID: master
workflow graph kmer_cache_retrieve

https://github.com/ncbi/pgap.git

Path: task_types/tt_kmer_cache_retrieve.cwl

Branch/Commit ID: dev
workflow graph abundance

abundace profiles from annotated files, for protein and/or rna

 https://github.com/MG-RAST/pipeline.git

Path: CWL/Workflows/abundance.workflow.cwl

Branch/Commit ID: master
workflow graph Bisulfite alignment and QC

https://github.com/apaul7/cancer-genomics-workflow.git

Path: definitions/pipelines/bisulfite.cwl

Branch/Commit ID: low-vaf
workflow graph picard_markduplicates

Mark duplicates

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/subworkflows/picard_markduplicates.cwl

Branch/Commit ID: 3bb03c9b
workflow graph Downsample and HaplotypeCaller

https://github.com/tmooney/cancer-genomics-workflow.git

Path: definitions/pipelines/downsample_and_recall.cwl

Branch/Commit ID: downsample_and_recall
workflow graph EMG QC workflow, (paired end version). Benchmarking with MG-RAST expt.

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/emg-qc-paired.cwl

Branch/Commit ID: a8abd0e
workflow graph mast.cwl

https://github.com/alahiff/fastwf.git

Path: mast.cwl

Branch/Commit ID: master
workflow graph bacterial_screening.cwl

https://github.com/ncbi/pgap.git

Path: vecscreen/bacterial_screening.cwl

Branch/Commit ID: master
workflow graph hi-c-processing-pairs-nore-nonorm.cwl

https://github.com/mr-c/4dn-dcic-pipelines-cwl.git

Path: cwl_awsem_v1/hi-c-processing-pairs-nore-nonorm.cwl

Branch/Commit ID: dev2