Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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main-somatic.cwl
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https://github.com/FarahZKhan/bcbio_test_cwl.git
Path: somatic/somatic-workflow/main-somatic.cwl Branch/Commit ID: master |
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TOPMed Alignment
A CWL wrapper of the TopMed alignment workflow described here: https://github.com/statgen/docker-alignment Tool Author: Hyun Min Kang (hmkang@umich.edu) and Adrian Tan (atks@umich.edu) Wrapper Author: Marko Zecevic (marko.zecevic@sbgenomics.com) |
https://github.com/stain/topmed-workflows.git
Path: aligner/sbg-alignment-cwl/topmed-alignment.cwl Branch/Commit ID: no-id |
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04-quantification-pe-stranded.cwl
RNA-seq 04 quantification |
https://github.com/alexbarrera/GGR-cwl.git
Path: v1.0/RNA-seq_pipeline/04-quantification-pe-stranded.cwl Branch/Commit ID: master |
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wf_loop_nested.cwl
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https://github.com/idaks/cwl_modeling.git
Path: yw_cwl_modeling/additional_test_cases/wf_loop_nested.cwl Branch/Commit ID: master |
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RNASelector as a CWL workflow
https://doi.org/10.1007/s12275-011-1213-z |
https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/rna-selector.cwl Branch/Commit ID: c1f8b22 |
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exome alignment with qc
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/alignment_exome.cwl Branch/Commit ID: master |
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conditional_markduplicates.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/conditional_markduplicates.cwl Branch/Commit ID: master |
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md5sum-workflow.cwl
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https://github.com/dockstore-testing/md5sum-checker.git
Path: md5sum/md5sum-workflow.cwl Branch/Commit ID: 1.0.0 |
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workflow-fasta-pratt.cwl
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https://github.com/ebi-wp/webservice-cwl.git
Path: workflows/workflow-fasta-pratt.cwl Branch/Commit ID: master |
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strelka workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/strelka_and_post_processing.cwl Branch/Commit ID: master |
