Explore Workflows
View already parsed workflows here or click here to add your own
Graph | Name | Retrieved From | View |
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workflow-fasta-pratt.cwl
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![]() Path: workflows/workflow-fasta-pratt.cwl Branch/Commit ID: master |
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Functional analyis of sequences that match the 16S SSU
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![]() Path: workflows/16S_taxonomic_analysis.cwl Branch/Commit ID: master |
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FragPipe: Filter - Quant - Report
This workflow takes the PeptideProphet, and the ProteinProphet output files, and applies a stringent False Discovery Rate (FDR) filtering. Peptide and proteins are filtered individually at 1% FDR. The high-quality PSMs, peptides, and proteins are then quantified using a label-free algorithm that uses the apex peak intensity as a measurement. Finally, the isobaric tags are quantified and annotated with the correct sample labels. |
![]() Path: FragPipe-Filter-Quant-Report/fragpipe-filter-quant-report.cwl Branch/Commit ID: main |
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PerformanceSummaryGenome_v0_1_0.cwl
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![]() Path: janis_pipelines/wgs_somatic/cwl/tools/PerformanceSummaryGenome_v0_1_0.cwl Branch/Commit ID: master |
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env-wf1.cwl
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![]() Path: tests/env-wf1.cwl Branch/Commit ID: main |
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cmsearch-multimodel.cwl
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![]() Path: workflows/cmsearch-multimodel.cwl Branch/Commit ID: 71d9c83 |
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steps.cwl
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![]() Path: subworkflows/steps.cwl Branch/Commit ID: 4e9c15b |
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QIIME2 Step 1 paired end sequences
QIIME2 Import and Demux Step 1 paired end sequences |
![]() Path: packed/qiime2-step1-import-demux-paired.cwl Branch/Commit ID: qiime2-workflow-paired Packed ID: main |
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Instac stage-in
Stage-in using Instac |
![]() Path: instac.cwl Branch/Commit ID: master Packed ID: main |
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Detect Variants workflow for nonhuman WGS pipeline
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![]() Path: definitions/pipelines/detect_variants_wgs_nonhuman.cwl Branch/Commit ID: a08de598edc04f340fdbff76c9a92336a7702022 |