Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Bacterial Annotation, pass 2, blastp-based functional annotation (first pass)
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https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_bacterial_annot_pass2.cwl Branch/Commit ID: f6950321e5c9ee733ad68a273d2ad8e802a6b982 |
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WGS QC workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/qc_wgs.cwl Branch/Commit ID: 869b331cfeb9dbd5907498e3eccdebc7c28283e5 |
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extract_capture_kit.cwl
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https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/extract_capture_kit.cwl Branch/Commit ID: 17823fcd036d134df803fbf76e23b0bc5eabedfd |
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bacterial_screening.cwl
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https://github.com/ncbi/pgap.git
Path: vecscreen/bacterial_screening.cwl Branch/Commit ID: 4ea5956bb97ea2eb6de124bc9b6a6a81a14fd2e7 |
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conditional_bamindex.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/conditional_bamindex.cwl Branch/Commit ID: 8edf6a5e4e7790434ad0742e50d0c97a5d0bb846 |
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wgs alignment with qc
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/wgs_alignment.cwl Branch/Commit ID: 5cb188131f786ed33156e2f0e3dd63ab9c04245d |
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integrity.cwl
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https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/integrity.cwl Branch/Commit ID: 18affdd927cc388fab2c113dc2ec6df782af2a52 |
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WGS QC workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/qc_wgs.cwl Branch/Commit ID: 7f9dfad8e45ca096ae738cff646195b2b1ba7d7f |
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01-qc-se.cwl
ATAC-seq 01 QC - reads: SE |
https://github.com/Duke-GCB/GGR-cwl.git
Path: v1.0/ATAC-seq_pipeline/01-qc-se.cwl Branch/Commit ID: 46e5078373d4668019485d27c71770aec9dd9f0e |
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umi per-lane alignment subworkflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/umi_alignment.cwl Branch/Commit ID: ddd748516b25256a461ea9277303406fa2759b00 |
