Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph Trim and reformat reads (single and paired end version)

https://github.com/EBI-Metagenomics/pipeline-v5.git

Path: workflows/subworkflows/amplicon/trimming-not-empty-subwf.cwl

Branch/Commit ID: a83ee883bb3c7480010fa952939fac771491ddf4
workflow graph func_ann_and_post_processing-subwf.cwl

https://github.com/EBI-Metagenomics/pipeline-v5.git

Path: workflows/subworkflows/assembly/func_ann_and_post_processing-subwf.cwl

Branch/Commit ID: a83ee883bb3c7480010fa952939fac771491ddf4
workflow graph snps_and_indels.cwl

https://github.com/mskcc/ACCESS-Pipeline.git

Path: workflows/subworkflows/snps_and_indels.cwl

Branch/Commit ID: b0f226a9ac5152f3afe0d38c8cd54aa25b8b01cf
workflow graph align-dir-pack.cwl#main

https://github.com/KBNLresearch/ochre.git

Path: ochre/cwl/align-dir-pack.cwl

Branch/Commit ID: a62bf3b31df83784c017d30a83ed8e01d454bf1c

Packed ID: main
workflow graph cosifer-workflow.cwl

https://github.com/inab/ipc_workflows.git

Path: cosifer/cwl/cosifer-workflow.cwl

Branch/Commit ID: 3bc3283a7e62f646703bcca2cd5a32955f2f5a31
workflow graph WGS QC workflow nonhuman

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/qc_wgs_nonhuman.cwl

Branch/Commit ID: 8da2b1cd6fa379b2c22baf9dad762d39630e6f46
workflow graph bact_get_kmer_reference

https://github.com/ncbi/pgap.git

Path: task_types/tt_bact_get_kmer_reference.cwl

Branch/Commit ID: 96dbb414d287f4382e2d477fb1851aeaa5f14f2b
workflow graph mut.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/mut.cwl

Branch/Commit ID: 1441c285e8a5afe399f5d52ca9059cb8bb513edb
workflow graph Run pindel on provided region

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/pindel_region.cwl

Branch/Commit ID: 479c9b3e3fa32ec9c7cd4073cfbccc675fd254d9
workflow graph l1a_workflow.cwl

https://github.com/nlahaye/sounder-sips-application.git

Path: cwl/l1a_workflow.cwl

Branch/Commit ID: 0d5a368095c85c0fd3598dcfb92a8af5c4305541