Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	wgs alignment with qc	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/alignment_wgs.cwl Branch/Commit ID: ac87e0584685fe04e4010ecd77ae4f055f21d788
	wgs alignment with qc	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/alignment_wgs.cwl Branch/Commit ID: 9161ef43f7bf0e22b365fde9ec92edcb8601798e
	pindel parallel workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pindel.cwl Branch/Commit ID: 9161ef43f7bf0e22b365fde9ec92edcb8601798e
	Bisulfite QC tools	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bisulfite_qc.cwl Branch/Commit ID: ac87e0584685fe04e4010ecd77ae4f055f21d788
	bam to trimmed fastqs and biscuit alignments	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_to_trimmed_fastq_and_biscuit_alignments.cwl Branch/Commit ID: ac87e0584685fe04e4010ecd77ae4f055f21d788
	kmer_build_tree	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_build_tree.cwl Branch/Commit ID: 42712bca4c3307d87b6b55f525a4c97cb6f7e288
	count-lines3-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/count-lines3-wf.cwl Branch/Commit ID: 520acbfb82455c4bdabd5f2ea24842804e1c9f58
	tracking_master.cwl	https://github.com/rosafilgueira/cyclon_usecase.git Path: run_cyclon/tracking_master.cwl Branch/Commit ID: 74541f70eb501c755dc11c8be7d5a8d4e3066211
	Seed Search Compartments	https://github.com/ncbi/pgap.git Path: protein_alignment/wf_seed.cwl Branch/Commit ID: 4f4448f71645275db5b84eb551990dfe3bf37cbb
	protein similarities run diamond on mutlple DBs and merge-sort results	https://github.com/MG-RAST/pipeline.git Path: CWL/Workflows/protein-diamond.workflow.cwl Branch/Commit ID: 7b1df2ecce5a8727f2c546c5baa45c919edd8a76