Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph strelkaSomaticVariantCaller_v0_1_0.cwl

https://github.com/PMCC-BioinformaticsCore/janis-pipelines.git

Path: janis_pipelines/wgs_somatic/cwl/tools/strelkaSomaticVariantCaller_v0_1_0.cwl

Branch/Commit ID: e6a35d208452fb00c25c588cc25d8ea4530a29ce
workflow graph fastq_clean_pe.cwl

https://github.com/nci-gdc/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/fastq_clean_pe.cwl

Branch/Commit ID: 1046947f8d2923e6563b3aceac9e435554c5bea1
workflow graph kf-cram2gvcf-custom.cwl

https://github.com/kids-first/kf-alignment-workflow.git

Path: workflows/kf-cram2gvcf-custom.cwl

Branch/Commit ID: a1cd86214398947c57529677ec10f97b606b7de2
workflow graph Bisulfite QC tools

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/bisulfite_qc.cwl

Branch/Commit ID: 8eb189a4a34dc8cd86380685f814c79a444a7601
workflow graph taxonomy_check_16S

https://github.com/ncbi/pgap.git

Path: task_types/tt_taxonomy_check_16S.cwl

Branch/Commit ID: dcbbce152fbff2637f102471fb80318244492853
workflow graph amplicon_metrics.cwl

https://github.com/nci-gdc/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/amplicon_metrics.cwl

Branch/Commit ID: cf2e9d7c3cc87ce97a1fbf73fad574b170fedcfb
workflow graph kf-cram2gvcf_calc_contam.cwl

https://github.com/kids-first/kf-alignment-workflow.git

Path: workflows/kf-cram2gvcf_calc_contam.cwl

Branch/Commit ID: a1cd86214398947c57529677ec10f97b606b7de2
workflow graph gcaccess_from_list

https://github.com/ncbi/pgap.git

Path: task_types/tt_gcaccess_from_list.cwl

Branch/Commit ID: dcbbce152fbff2637f102471fb80318244492853
workflow graph wf_clipseqcore_se_1barcode.cwl

https://github.com/YeoLab/eclip.git

Path: cwl/wf_clipseqcore_se_1barcode.cwl

Branch/Commit ID: 7196b92e262fe5f8acee04cb0d1b6fd23e4febdc
workflow graph Add snv and indel bam-readcount files to a vcf

https://github.com/litd/analysis-workflows.git

Path: definitions/subworkflows/vcf_readcount_annotator.cwl

Branch/Commit ID: 1a908acc8059c2381ed146c6be1668f4bf1cfa73