Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph cond-with-defaults.cwl

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/conditionals/cond-with-defaults.cwl

Branch/Commit ID: main
workflow graph annotator_sub_wf.cwl

This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow!

https://github.com/david4096/oxog-dockstore-tools.git

Path: annotator_sub_wf.cwl

Branch/Commit ID: develop
workflow graph topmed-alignment-checker.cwl

https://github.com/stain/topmed-workflows.git

Path: aligner/sbg-alignment-cwl/topmed-alignment-checker.cwl

Branch/Commit ID: 4c46a709e7b986a09b9eb27ccdb0540e69e006
workflow graph minibam_sub_wf.cwl

This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow!

https://github.com/icgc-tcga-pancancer/pcawg-minibam.git

Path: minibam_sub_wf.cwl

Branch/Commit ID: 1.0.0
workflow graph qiime2 diversity analyses

Alpha and beta diversity analysis from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/

 https://github.com/Duke-GCB/bespin-cwl.git

Path: packed/qiime2-step3-alpha-analysis.cwl

Branch/Commit ID: qiime2-workflow-paired

Packed ID: qiime2-06-alpha-beta-diversity.cwl
workflow graph waltz_workflow_all_bams.cwl

https://github.com/andurill/ACCESS-Pipeline.git

Path: workflows/waltz/waltz_workflow_all_bams.cwl

Branch/Commit ID: master
workflow graph per_cluster_workflow.cwl

https://github.com/mr-c/scalability-reproducibility-chapter.git

Path: CWL/per_cluster_workflow.cwl

Branch/Commit ID: CWL
workflow graph 03-map-pe.cwl

STARR-seq 03 mapping - reads: PE

 https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/STARR-seq_pipeline/03-map-pe.cwl

Branch/Commit ID: master
workflow graph bams2gvcf.woBQSR.multisamples.cwl

https://github.com/ddbj/human-reseq.git

Path: Workflows/bams2gvcf.woBQSR.multisamples.cwl

Branch/Commit ID: master
workflow graph scRNA-seq pipeline using Salmon and Alevin

https://github.com/hubmapconsortium/salmon-rnaseq.git

Path: pipeline.cwl

Branch/Commit ID: 9225fa2