Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
|---|---|---|---|
|
|
Raw sequence data to BQSR
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/sequence_to_bqsr.cwl Branch/Commit ID: 26806d99f8e2a241715fd081e712d4e3763db5b8 |
|
|
|
Exome QC workflow
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/qc_exome.cwl Branch/Commit ID: 26806d99f8e2a241715fd081e712d4e3763db5b8 |
|
|
|
Raw sequence data to BQSR
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/sequence_to_bqsr.cwl Branch/Commit ID: 6f9f8a2057c6a9f221a44559f671e87a75c70075 |
|
|
|
Align reference proteins plane complete workflow
|
https://github.com/ncbi/pgap.git
Path: protein_alignment/wf_protein_alignment.cwl Branch/Commit ID: 61e3752f1f5e2ee498fa024c235226f8580be942 |
|
|
|
Run tRNAScan
|
https://github.com/ncbi/pgap.git
Path: bacterial_trna/wf_trnascan.cwl Branch/Commit ID: 61e3752f1f5e2ee498fa024c235226f8580be942 |
|
|
|
Create Genomic Collection for Bacterial Pipeline, ASN.1 input
|
https://github.com/ncbi/pgap.git
Path: genomic_source/wf_genomic_source_asn.cwl Branch/Commit ID: 61e3752f1f5e2ee498fa024c235226f8580be942 |
|
|
|
Run genomic CMsearch (Rfam rRNA)
|
https://github.com/ncbi/pgap.git
Path: bacterial_ncrna/wf_gcmsearch.cwl Branch/Commit ID: 61e3752f1f5e2ee498fa024c235226f8580be942 |
|
|
|
Exome QC workflow
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/qc_exome.cwl Branch/Commit ID: 6f9f8a2057c6a9f221a44559f671e87a75c70075 |
|
|
|
Non-Coding Bacterial Genes
|
https://github.com/ncbi/pgap.git
Path: bacterial_noncoding/wf_bacterial_noncoding.cwl Branch/Commit ID: 61e3752f1f5e2ee498fa024c235226f8580be942 |
|
|
|
Bacterial Annotation, pass 1, genemark training, by HMMs (first pass)
|
https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_bacterial_annot_pass1.cwl Branch/Commit ID: 61e3752f1f5e2ee498fa024c235226f8580be942 |
