Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph kmer_top_n_extract

https://github.com/ncbi/pgap.git

Path: task_types/tt_kmer_top_n_extract.cwl

Branch/Commit ID: 0788fbf0432567fd4fc131c6757904841ccd72ba

workflow graph workflow.cwl

https://github.com/NAL-i5K/Organism_Onboarding.git

Path: flow_create_genomics-workspace_yml/flow_create_yml/workflow.cwl

Branch/Commit ID: c73baa5e10f074be767be0ff8691fdbc2047ef4a

workflow graph Detect DoCM variants

https://github.com/litd/analysis-workflows.git

Path: definitions/subworkflows/docm_germline.cwl

Branch/Commit ID: 193b8de694f262ad55c7635a603c20c124748583

workflow graph revcomp.cwl

https://github.com/alexbarrera/GGR-cwl.git

Path: workflows/workflows/sanbi_cwltutorial/revcomp/revcomp.cwl

Branch/Commit ID: 517487e59d240c197fc91f08d20dadca97a9e121

workflow graph bam to trimmed fastqs and HISAT alignments

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/bam_to_trimmed_fastq_and_hisat_alignments.cwl

Branch/Commit ID: 700e73aaed6db1ad538dd27b2e1709f436ad3edb

workflow graph Example of setting up a simulation system

Common Workflow Language example that illustrate the process of setting up a simulation system containing a protein, step by step, using the BioExcel Building Blocks library (biobb). The particular example used is the Lysozyme protein (PDB code 1AKI).

https://github.com/bioexcel/biobb_wf_cwl_tutorial.git

Path: biobb_wf_cwl_tutorial/examples/BioExcel-CWL-MDSetup.cwl

Branch/Commit ID: 1ceb79101ec98fbfc142a5f70ca23a8b49efc2ea

workflow graph count-lines5-wf.cwl

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/count-lines5-wf.cwl

Branch/Commit ID: 84939620c3eec1ab11369849c63237ebfa48da41

workflow graph workflow.cwl

https://github.com/NAL-i5K/Organism_Onboarding.git

Path: flow_apollo2_data_processing/processing/workflow.cwl

Branch/Commit ID: 243ba78438c6e9dfa3dfbfd6751124c978dd1c25

workflow graph Nested workflow example

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/nested.cwl

Branch/Commit ID: eba80916b5cde8bdbd56c077c94240ddf796a27b

workflow graph count-lines4-wf.cwl

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/count-lines4-wf.cwl

Branch/Commit ID: 520acbfb82455c4bdabd5f2ea24842804e1c9f58