Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph Subworkflow to allow calling different SV callers which require bam files as inputs

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/single_sample_sv_callers.cwl

Branch/Commit ID: e8b7759826df40b8bb821b40b15aea960a4951c4
workflow graph workflow.cwl

https://github.com/nal-i5k/organism_onboarding.git

Path: flow_dispatch/2other_species/workflow.cwl

Branch/Commit ID: 243ba78438c6e9dfa3dfbfd6751124c978dd1c25
workflow graph Hello World

Puts a message into a file using echo

 https://github.com/common-workflow-language/cwlviewer.git

Path: src/test/resources/cwl/hello/hello-param.cwl

Branch/Commit ID: 23d9fa710022e84d9a99221f53de7c0432f0bc8a

Packed ID: main
workflow graph Resolve duplicate/overlapping calls in the gVCFs in a named list

https://github.com/curoverse/l7g.git

Path: cwl-version/clean/cwl/tiling_clean_gvcf_named.cwl

Branch/Commit ID: 2d067e70af7c1a49a2a015ddcd0d859b0b885e98
workflow graph kf_alignment_optimized_wf

https://github.com/inab/vre_cwl_executor.git

Path: tests/basic/data/workflows/basic_example_2.cwl

Branch/Commit ID: 4c1432ba1444cc9fb3c0cd145113ef16b4100931
workflow graph umi duplex alignment fastq workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/alignment_umi_duplex.cwl

Branch/Commit ID: e8b7759826df40b8bb821b40b15aea960a4951c4
workflow graph Varscan Workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/varscan_germline.cwl

Branch/Commit ID: 700e73aaed6db1ad538dd27b2e1709f436ad3edb
workflow graph WGS QC workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/qc_wgs.cwl

Branch/Commit ID: 700e73aaed6db1ad538dd27b2e1709f436ad3edb
workflow graph Per-chromosome pindel

https://github.com/fgomez02/analysis-workflows.git

Path: definitions/subworkflows/pindel_cat.cwl

Branch/Commit ID: 9c9e6a6a48eb321804ce772a2c2c12b4f2f32529
workflow graph Exome QC workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/qc_exome_no_verify_bam.cwl

Branch/Commit ID: ac87e0584685fe04e4010ecd77ae4f055f21d788