Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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taxcheck.cwl
Perform taxonomic identification tasks on an input genome |
https://github.com/ncbi/pgap.git
Path: taxcheck.cwl Branch/Commit ID: c7c674b873b9925b28ffbd602974eec4bfe78cf9 |
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scRNA-seq pipeline using Salmon and Alevin
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https://github.com/hubmapconsortium/visium-pipeline.git
Path: pipeline.cwl Branch/Commit ID: 656540cf10b1b2ca5b074c32ec49f6ff699c7ed1 |
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diffbind-parallel.cwl
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https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/ChIP-Seq/diffbind-parallel.cwl Branch/Commit ID: 1b1cb5bbbe53a2dd5d7de7cdbff19c1bdbe23a49 |
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pipeline.cwl#openoil_pipeline
Animation of an oil spill with openoil |
https://github.com/ILIAD-ocean-twin/application_package.git
Path: openoil/pipeline.cwl Branch/Commit ID: 7e4399c3dd48a929d202b0e0a24bdbf520640e89 Packed ID: openoil_pipeline |
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tt_fscr_calls_pass1
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https://github.com/ncbi/pgap.git
Path: task_types/tt_fscr_calls_pass1.cwl Branch/Commit ID: c7c674b873b9925b28ffbd602974eec4bfe78cf9 |
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Running cellranger count and lineage inference
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/single_cell_rnaseq.cwl Branch/Commit ID: 8da2b1cd6fa379b2c22baf9dad762d39630e6f46 |
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Dockstore.cwl
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https://github.com/kathy-t/ghapps-single-workflow.git
Path: Dockstore.cwl Branch/Commit ID: 926db1e3196de18e3fe7ffb26db497d482a65908 |
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kfdrc-jointgenotyping-refinement-workflow.cwl
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https://github.com/kids-first/kf-jointgenotyping-workflow.git
Path: workflow/kfdrc-jointgenotyping-refinement-workflow.cwl Branch/Commit ID: 343cdc7659dc46b0fe1c41ef195a3d61ef2d42a7 |
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prefetch_fastq.cwl
Worfklow combining an SRA fetch from NCBI with a fastq-dump cmd |
https://github.com/fjrmoreews/cwl-workflow-SARS-CoV-2.git
Path: bio-cwl-tools/sratoolkit/prefetch_fastq.cwl Branch/Commit ID: 82b291f7d205024b2db7d4106a448c8a65855439 |
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workflow.cwl
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https://github.com/NAL-i5K/Organism_Onboarding.git
Path: flow_dispatch/2other_species/workflow.cwl Branch/Commit ID: 556884e8e205295e561b1d9140d836cdd6c1d8c9 |
