Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	merge_filter.cwl	https://github.com/CompEpigen/ChIPseq_workflows.git Path: CWL/workflow_modules/merge_filter.cwl Branch/Commit ID: 503df61c4d7fd6078a4089b62382a3c6811d7749
	trnascan_wnode and gpx_qdump combined	https://github.com/ncbi/pgap.git Path: bacterial_trna/wf_scan_and_dump.cwl Branch/Commit ID: 7e875f77b615b4f7ebfb23a1da30eb216cc52919
	fp_filter workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/fp_filter.cwl Branch/Commit ID: 4bc0a4577d626b65a4b44683e5a1ab2f7d7faf4c
	Raw sequence data to BQSR	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/sequence_to_bqsr.cwl Branch/Commit ID: f9600f9959acdc30259ba7e64de61104c9b01f0b
	Exome QC workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/qc_exome.cwl Branch/Commit ID: f9600f9959acdc30259ba7e64de61104c9b01f0b
	infuse_pipeline.cwl	https://github.com/cancerit/cgpRna.git Path: cwls/infuse_pipeline.cwl Branch/Commit ID: 177d01c89c1d8d3f2fe09532c8118f4c35e49f4e
	workflow.cwl	https://github.com/NAL-i5K/Organism_Onboarding.git Path: flow_dispatch/2other_species/workflow.cwl Branch/Commit ID: a1533848372b4dd8237c45df91fe26b620113e38
	Super-enhancer post ChIP-Seq analysis Super-enhancers, consist of clusters of enhancers that are densely occupied by the master regulators and Mediator. Super-enhancers differ from typical enhancers in size, transcription factor density and content, ability to activate transcription, and sensitivity to perturbation. Use to create stitched enhancers, and to separate super-enhancers from typical enhancers using sequencing data (.bam) given a file of previously identified constituent enhancers (.gff)	https://github.com/datirium/workflows.git Path: workflows/super-enhancer.cwl Branch/Commit ID: 730b40bc403263b724399a952c0f3e2d28f13519
	Subworkflow to allow calling different SV callers which require bam files as inputs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/single_sample_sv_callers.cwl Branch/Commit ID: ec5355f335852e51c6938809c16ea1d230a3f983
	workflow.cwl	https://github.com/NAL-i5K/Organism_Onboarding.git Path: flow_md5checksums/workflow.cwl Branch/Commit ID: a1533848372b4dd8237c45df91fe26b620113e38