Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	gp_makeblastdb	https://github.com/ncbi/pgap.git Path: progs/gp_makeblastdb.cwl Branch/Commit ID: 7b21dc40840852f3942c31b9c472346ea3f9a3ca
	Align reference proteins plane complete workflow	https://github.com/ncbi/pgap.git Path: protein_alignment/wf_protein_alignment.cwl Branch/Commit ID: 7b21dc40840852f3942c31b9c472346ea3f9a3ca
	Execute CRISPR	https://github.com/ncbi/pgap.git Path: bacterial_mobile_elem/wf_bacterial_mobile_elem.cwl Branch/Commit ID: 7b21dc40840852f3942c31b9c472346ea3f9a3ca
	exome alignment with qc	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/alignment_exome.cwl Branch/Commit ID: 8438316338e66823e1c9aca9f675b2bf33f2aa59
	Bacterial Annotation, pass 2, blastp-based functional annotation (first pass)	https://github.com/ncbi/pgap.git Path: bacterial_annot/wf_bacterial_annot_pass2.cwl Branch/Commit ID: 7b21dc40840852f3942c31b9c472346ea3f9a3ca
	Subworkflow that runs cnvkit in single sample mode and returns a vcf file	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/cnvkit_single_sample.cwl Branch/Commit ID: 8dc462a7d9ba1479f764682af99c69d8574cb3dc
	Seed Protein Alignments I	https://github.com/ncbi/pgap.git Path: protein_alignment/wf_seed_1.cwl Branch/Commit ID: 16d1198871195e2229fd44dd0ad94a4ed6a87caf
	schemadef-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/schemadef-wf.cwl Branch/Commit ID: 0b3846fbf866584870a0b1ce902b5574f549dfee
	pindel parallel workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pindel.cwl Branch/Commit ID: 8dc462a7d9ba1479f764682af99c69d8574cb3dc
	HS Metrics workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/hs_metrics.cwl Branch/Commit ID: a670f323e77e02d9b77be9a13d73d5276dd3676c