Explore Workflows

Workflow without inputs.

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/no-inputs-wf.cwl

Branch/Commit ID: master

This wraps the md5sum tool with a checker workflow that runs both the tool and a tool that performs verification of results

https://github.com/DataBiosphere/topmed-workflows.git

Path: CRAM-no-header-md5sum/CRAM_md5sum_checker_wrapper.cwl

Branch/Commit ID: 1.19.0

https://github.com/fgomez02/analysis-workflows.git

Path: definitions/pipelines/bisulfite.cwl

Branch/Commit ID: No_filters_detect_variants

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/collate_unique_SSU_headers.cwl

Branch/Commit ID: 8515542

https://github.com/apaul7/cancer-genomics-workflow.git

Path: definitions/subworkflows/align.cwl

Branch/Commit ID: low-vaf

Taxonomic analysis from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/

https://github.com/duke-gcb/bespin-cwl.git

Path: packed/qiime2-step2-dada2-paired.cwl

Branch/Commit ID: qiime2-workflow-paired

Packed ID: qiime2-08-taxonomic-analysis.cwl

https://github.com/ncbi/pgap.git

Path: task_types/tt_blastn_wnode.cwl

Branch/Commit ID: 89098668413e90519c99b35143bffec509d3599c

https://github.com/KBNLresearch/ochre.git

Path: ochre/cwl/word-mapping-test-files-wf.cwl

Branch/Commit ID: master

Packed ID: align-texts-wf.cwl

ATAC-seq 02 trimming - reads: SE

https://github.com/Duke-GCB/GGR-cwl.git

Path: v1.0/ATAC-seq_pipeline/02-trim-se.cwl

Branch/Commit ID: master

Runs RNA-Seq BioWardrobe basic analysis with pair-end data file.

https://github.com/Barski-lab/workflows.git

Path: workflows/rnaseq-pe.cwl

Branch/Commit ID: master