Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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umi per-lane alignment subworkflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/umi_alignment.cwl Branch/Commit ID: 3b6d0475c80f5e452793a46a38ee188742b86595 |
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gp_makeblastdb
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https://github.com/ncbi/pgap.git
Path: progs/gp_makeblastdb.cwl Branch/Commit ID: 5c40c5a0464c84076e0e407a0e05522b43bdc0a6 |
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scatter GATK HaplotypeCaller over intervals
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/gatk_haplotypecaller_iterator.cwl Branch/Commit ID: e56f1024306aeb427d8aae2fff715ed2e8b8f86f |
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Add snv and indel bam-readcount files to a vcf
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/vcf_readcount_annotator.cwl Branch/Commit ID: 8dc462a7d9ba1479f764682af99c69d8574cb3dc |
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echo-wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/override/echo-wf.cwl Branch/Commit ID: cd779a90a4336563dcf13795111f502372c6af83 |
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blastp_wnode_naming
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https://github.com/ncbi/pgap.git
Path: task_types/tt_blastp_wnode_naming.cwl Branch/Commit ID: 5c40c5a0464c84076e0e407a0e05522b43bdc0a6 |
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Bisulfite QC tools
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bisulfite_qc.cwl Branch/Commit ID: 6949082038c1ad36d6e9848b97a2537aef2d3805 |
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scatter GATK HaplotypeCaller over intervals
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/gatk_haplotypecaller_iterator.cwl Branch/Commit ID: 8438316338e66823e1c9aca9f675b2bf33f2aa59 |
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protein_extract
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https://github.com/ncbi/pgap.git
Path: progs/protein_extract.cwl Branch/Commit ID: f76a7f4a81ef4e60fa9a3964445162c92bf3d57c |
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Varscan Workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/varscan_germline.cwl Branch/Commit ID: e56f1024306aeb427d8aae2fff715ed2e8b8f86f |
