Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph kfdrc_bwamem_subwf.cwl

https://github.com/kids-first/kf-alignment-workflow.git

Path: workflows/dev/ultra-opt/workflows/kfdrc_bwamem_subwf.cwl

Branch/Commit ID: d822501de724a7c8ecf49a2d9f15fbb62029afd1
workflow graph tt_fscr_calls_pass1

https://github.com/ncbi/pgap.git

Path: task_types/tt_fscr_calls_pass1.cwl

Branch/Commit ID: f225cd99b0e0a5043dd102f8b33a6139fefe9ea4
workflow graph count-lines17-wf.cwl

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/count-lines17-wf.cwl

Branch/Commit ID: 40fcfc01812046f012acf5153cc955ee848e69e3
workflow graph mutect parallel workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/mutect.cwl

Branch/Commit ID: ffd73951157c61c1581d346628d75b61cdd04141
workflow graph kmer_build_tree

https://github.com/ncbi/pgap.git

Path: task_types/tt_kmer_build_tree.cwl

Branch/Commit ID: f225cd99b0e0a5043dd102f8b33a6139fefe9ea4
workflow graph samtoolsW.cwl

Author: AMBARISH KUMAR er.ambarish@gmail.com; ambari73_sit@jnu.ac.in This is a proposed standard operating procedure for genomic variant detection using VARSCAN. It is hoped to be effective and useful for getting SARS-CoV-2 genome variants. It uses Illumina RNASEQ reads and genome sequence.

https://github.com/ambarishK/bio-cwl-tools.git

Path: samtoolsW.cwl

Branch/Commit ID: dccb12c85526c878ce3a489f9502350d187955a5
workflow graph cmsearch-multimodel.cwl

https://github.com/proteinswebteam/ebi-metagenomics-cwl.git

Path: workflows/cmsearch-multimodel.cwl

Branch/Commit ID: cac44f2cf14110fde9951161c663c4525772f616
workflow graph Filter Protein Seeds I; Find ProSplign Alignments I

https://github.com/ncbi/pgap.git

Path: protein_alignment/wf_compart_filter_prosplign.cwl

Branch/Commit ID: dcbbce152fbff2637f102471fb80318244492853
workflow graph blastp_wnode_naming

https://github.com/ncbi/pgap.git

Path: task_types/tt_blastp_wnode_naming.cwl

Branch/Commit ID: 551493f5c24b757a46cd22821a05e6ac6dcceb7f
workflow graph Apply filters to VCF file

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/filter_vcf.cwl

Branch/Commit ID: 038cb3617a1966a1057386adcde97ce55d9e1139