Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	FragPipe_Filter_Quant_Report.wf.cwl	https://github.com/davidroberson/fragpipe-proteomics-pipeline-tutorial.git Path: FragPipe_Filter_Quant_Report.wf.cwl Branch/Commit ID: ccbb5317e8a2ddf36aab215a12d65f89d152e63b
	gvcf-distr.cwl	https://github.com/Sentieon/Sentieon-cwl.git Path: stage/gvcf-distr.cwl Branch/Commit ID: 845f4699c5fce96a4c708a553b3701c9cf296653
	Subsample BAM file creating a tagAlign and pseudoreplicates This workflow creates a subsample from a BAM file creating a tagAlign and pseudoreplicates	https://github.com/ncbi/cwl-ngs-workflows-cbb.git Path: workflows/File-formats/subample-pseudoreplicates.cwl Branch/Commit ID: 3247592a89deafaa0d9c5910a1cb1d000ef9b098
	exome alignment with qc	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/alignment_exome.cwl Branch/Commit ID: 061d3a2fbcd8a1c39c0b38c549e528deb24a9d54
	Hello World Outputs a message using echo	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/hello-workflow.cwl Branch/Commit ID: 7dec97bb8f0bc2d9e9eb710faf41f2e98cc7cdda
	cache_asnb_entries	https://github.com/ncbi/pgap.git Path: task_types/tt_cache_asnb_entries.cwl Branch/Commit ID: 1b9094d70f620bb2e51072dd2150150aa4927439
	snapanalysis_setup_and_analyze.cwl	https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git Path: steps/snapanalysis_setup_and_analyze.cwl Branch/Commit ID: 5465f666aac446a6d66fed1819e48a79395f6b02
	03-map-pe.cwl ATAC-seq 03 mapping - reads: PE	https://github.com/Duke-GCB/GGR-cwl.git Path: v1.0/ATAC-seq_pipeline/03-map-pe.cwl Branch/Commit ID: 67e8ccd5abddbd9e27f23ceeb95536fecf792d93
	fail-unconnected.cwl	https://github.com/common-workflow-language/cwl-v1.1.git Path: tests/fail-unconnected.cwl Branch/Commit ID: 50251ef931d108c09bed2d330d3d4fe9c562b1c3
	Subworkflow to allow calling different SV callers which require bam files as inputs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/single_sample_sv_callers.cwl Branch/Commit ID: 195b4ab487c939eb32a55d9f78bc1befd100caae