Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph STAR-RNA-Seq alignment and transcript/gene abundance workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/rnaseq_star_fusion.cwl

Branch/Commit ID: master
workflow graph targeted alignment and low vaf variant detection

https://github.com/apaul7/cancer-genomics-workflow.git

Path: definitions/pipelines/targeted_low_vaf_pipeline.cwl

Branch/Commit ID: low-vaf
workflow graph WGS and MT analysis for fastq files

rna / protein - qc, preprocess, filter, annotation, index, abundance

 https://github.com/MG-RAST/pipeline.git

Path: CWL/Workflows/wgs-noscreen-fasta.workflow.cwl

Branch/Commit ID: master
workflow graph Long-covid.cwl

https://github.com/cwlviewer-test/Long-covid---aedea650-7a21-11ed-b9d2-e51f21933d80.git

Path: Long-covid---aede7f40-7a21-11ed-b9d2-e51f21933d80/Long-covid.cwl

Branch/Commit ID: read-potential-cases-disc
workflow graph collate_unique_SSU_headers.cwl

https://github.com/farahzkhan/ebi-metagenomics-cwl.git

Path: tools/collate_unique_SSU_headers.cwl

Branch/Commit ID: master
workflow graph SPRM pipeline

https://github.com/hubmapconsortium/sprm.git

Path: pipeline.cwl

Branch/Commit ID: 2ddb0ce
workflow graph cnv_codex

CNV CODEX calling

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/cwl/subworkflows/cnv_codex.cwl

Branch/Commit ID: 1.0.6
workflow graph 5S-from-tablehits.cwl

https://github.com/proteinswebteam/ebi-metagenomics-cwl.git

Path: tools/5S-from-tablehits.cwl

Branch/Commit ID: 5dc7c5c
workflow graph main.cwl

https://github.com/smc-rna-challenge/zhanghj-8071387.git

Path: main.cwl

Branch/Commit ID: master
workflow graph abra_workflow.cwl

https://github.com/mskcc/Innovation-Pipeline.git

Path: workflows/ABRA/abra_workflow.cwl

Branch/Commit ID: master