Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Functional analyis of sequences that match the 16S SSU
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https://github.com/proteinswebteam/ebi-metagenomics-cwl.git
Path: workflows/16S_taxonomic_analysis.cwl Branch/Commit ID: master |
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sac-preprocess.cwl#align-texts-wf.cwl
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https://github.com/KBNLresearch/ochre.git
Path: ochre/cwl/sac-preprocess.cwl Branch/Commit ID: master Packed ID: align-texts-wf.cwl |
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RNASelector as a CWL workflow
https://doi.org/10.1007/s12275-011-1213-z |
https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/rna-selector.cwl Branch/Commit ID: caea457 |
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WGS and MT analysis for fastq files
rna / protein - qc, preprocess, filter, annotation, index, abundance |
https://github.com/MG-RAST/pipeline.git
Path: CWL/Workflows/wgs-fasta.workflow.cwl Branch/Commit ID: master |
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trnascan_wnode and gpx_qdump combined
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https://github.com/ncbi/pgap.git
Path: bacterial_trna/wf_scan_and_dump.cwl Branch/Commit ID: master |
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exomeseq-00-prepare-reference-data.cwl
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https://github.com/Duke-GCB/bespin-cwl.git
Path: subworkflows/exomeseq-00-prepare-reference-data.cwl Branch/Commit ID: master |
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hi-c-processing-parta-juicer.cwl
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https://github.com/mr-c/4dn-dcic-pipelines-cwl.git
Path: cwl_awsem_v1/hi-c-processing-parta-juicer.cwl Branch/Commit ID: master |
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rnaseq-alignment-circRNA-multiple-samples
This workflow aligns multiple samples using STAR for paired-end samples to be used in circRNA pipeline |
https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/Alignments/star-alignment-circRNA-multiple-samples-default.cwl Branch/Commit ID: master |
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contam_euk.cwl
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https://github.com/NCBI-Hackathons/ContamFilter.git
Path: cwl/workflow/contam_euk.cwl Branch/Commit ID: master |
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wf_contam_detect.cwl
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https://github.com/ncbi/pipelines.git
Path: contam_filter/wf_contam_detect.cwl Branch/Commit ID: master |
