Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	vecscreen.cwl	https://github.com/ncbi/pgap.git Path: vecscreen/vecscreen.cwl Branch/Commit ID: 5c40c5a0464c84076e0e407a0e05522b43bdc0a6
	Prepare user input Prepare user input for NCBI-PGAP pipeline	https://github.com/ncbi/pgap.git Path: prepare_user_input2.cwl Branch/Commit ID: 5c40c5a0464c84076e0e407a0e05522b43bdc0a6
	PGAP Pipeline PGAP pipeline for external usage, powered via containers	https://github.com/ncbi/pgap.git Path: wf_common.cwl Branch/Commit ID: 5c40c5a0464c84076e0e407a0e05522b43bdc0a6
	dynresreq-workflow.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/dynresreq-workflow.cwl Branch/Commit ID: 0b3846fbf866584870a0b1ce902b5574f549dfee
	SV filtering workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/filter_sv_vcf.cwl Branch/Commit ID: ec5355f335852e51c6938809c16ea1d230a3f983
	pymethylprocess.cwl	https://github.com/Christensen-Lab-Dartmouth/PyMethylProcess.git Path: cwl/workflows/pymethylprocess.cwl Branch/Commit ID: 2ae2df03a033ce4b97d09cae031044a4b7efeb9d
	pass-unconnected.cwl	https://github.com/common-workflow-language/common-workflow-language.git Path: v1.0/v1.0/pass-unconnected.cwl Branch/Commit ID: 9a23706ec061c5d2c02ff60238d218aadf0b5db9
	merge and annotate svs with population allele freq and vep	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/merge_svs.cwl Branch/Commit ID: ec5355f335852e51c6938809c16ea1d230a3f983
	cluster_blastp_wnode and gpx_qdump combined	https://github.com/ncbi/pgap.git Path: task_types/tt_cluster_and_qdump.cwl Branch/Commit ID: 5c40c5a0464c84076e0e407a0e05522b43bdc0a6
	Subworkflow that runs cnvkit in single sample mode and returns a vcf file	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/cnvkit_single_sample.cwl Branch/Commit ID: ec5355f335852e51c6938809c16ea1d230a3f983