Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	strelkaGermlineVariantCaller_v0_1_0.cwl	https://github.com/PMCC-BioinformaticsCore/janis-pipelines.git Path: janis_pipelines/wgs_germline/cwl/tools/strelkaGermlineVariantCaller_v0_1_0.cwl Branch/Commit ID: 67f1401030337d9ba36f23d4a2bf8366764786b5
	mergeAndMarkBams_4_1_3.cwl	https://github.com/PMCC-BioinformaticsCore/janis-pipelines.git Path: janis_pipelines/wgs_germline/cwl/tools/mergeAndMarkBams_4_1_3.cwl Branch/Commit ID: 67f1401030337d9ba36f23d4a2bf8366764786b5
	BwaAligner_1_0_0.cwl	https://github.com/PMCC-BioinformaticsCore/janis-pipelines.git Path: janis_pipelines/wgs_germline/cwl/tools/BwaAligner_1_0_0.cwl Branch/Commit ID: 67f1401030337d9ba36f23d4a2bf8366764786b5
	Bacterial Annotation, pass 2, blastp-based functional annotation (first pass)	https://github.com/ncbi/pgap.git Path: bacterial_annot/wf_bacterial_annot_pass2.cwl Branch/Commit ID: f225cd99b0e0a5043dd102f8b33a6139fefe9ea4
	count-lines8-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/count-lines8-wf.cwl Branch/Commit ID: 7bfe73a708dbf31d037303bb5a8fed1a79984b0f
	echo-wf-default.cwl	https://github.com/common-workflow-language/common-workflow-language.git Path: v1.0/v1.0/echo-wf-default.cwl Branch/Commit ID: 148f11b11d31c098196e649f680797f0b4680114
	Raw sequence data to BQSR	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/sequence_to_bqsr.cwl Branch/Commit ID: 038cb3617a1966a1057386adcde97ce55d9e1139
	scatter-valuefrom-wf2.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/scatter-valuefrom-wf2.cwl Branch/Commit ID: 1e5ad10c6b0d1c5f531737d12ef64062a00baef2
	bacterial_kmer	https://github.com/ncbi/pgap.git Path: bacterial_kmer/wf_bacterial_kmer.cwl Branch/Commit ID: 2229f26ec424f9ebeb3db7fec3bd3f84a38c7485
	Exome QC workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/qc_exome.cwl Branch/Commit ID: 038cb3617a1966a1057386adcde97ce55d9e1139