Explore Workflows
View already parsed workflows here or click here to add your own
Graph | Name | Retrieved From | View |
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Non-Coding Bacterial Genes
|
https://github.com/ncbi/pgap.git
Path: bacterial_noncoding/wf_bacterial_noncoding.cwl Branch/Commit ID: b38b0070edf910984f29a4a495b5dfa525b8b305 |
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download_quality_control.cwl
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https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/sra/download_quality_control.cwl Branch/Commit ID: 3247592a89deafaa0d9c5910a1cb1d000ef9b098 |
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bact_get_kmer_reference
|
https://github.com/ncbi/pgap.git
Path: task_types/tt_bact_get_kmer_reference.cwl Branch/Commit ID: a402541b8530f30eab726c160da90a23036847a1 |
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cache_asnb_entries
|
https://github.com/ncbi/pgap.git
Path: task_types/tt_cache_asnb_entries.cwl Branch/Commit ID: b38b0070edf910984f29a4a495b5dfa525b8b305 |
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Raw sequence data to BQSR
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/sequence_to_bqsr.cwl Branch/Commit ID: 061d3a2fbcd8a1c39c0b38c549e528deb24a9d54 |
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count-lines1-wf.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/count-lines1-wf.cwl Branch/Commit ID: 1f3ef888d9ef2306c828065c460c1800604f0de4 |
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assm_assm_blastn_wnode
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https://github.com/ncbi/pgap.git
Path: task_types/tt_assm_assm_blastn_wnode.cwl Branch/Commit ID: 94c97cfc95a5bf102a6f9206e045ea1afb768317 |
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bulk-atac-seq-pipeline.cwl
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https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git
Path: bulk-atac-seq-pipeline.cwl Branch/Commit ID: e1af1eb62aa9f757bded9b995411d25e098b3572 |
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adapter for sequence_align_and_tag
Some workflow engines won't stage files in our nested structure, so parse it out here |
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/sequence_align_and_tag_adapter.cwl Branch/Commit ID: b8000c793d6e7ce4d690406c4f914c5c62acd51f |
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tt_hmmsearch_wnode.cwl
|
https://github.com/ncbi/pgap.git
Path: task_types/tt_hmmsearch_wnode.cwl Branch/Commit ID: 4e2a295bb6c8b4982402ee80538a0cdb8ee6b6dd |