Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Bacterial Annotation, pass 4, blastp-based functional annotation (second pass)	https://github.com/ncbi/pgap.git Path: bacterial_annot/wf_bacterial_annot_pass4.cwl Branch/Commit ID: 485f0be56cea77bff62b797ae7eff422a990a92c
	Execute CRISPR	https://github.com/ncbi/pgap.git Path: bacterial_mobile_elem/wf_bacterial_mobile_elem.cwl Branch/Commit ID: 485f0be56cea77bff62b797ae7eff422a990a92c
	Bacterial Annotation, pass 3, structural annotation, functional annotation: ab initio GeneMark, by WP, by HMM (second pass)	https://github.com/ncbi/pgap.git Path: bacterial_annot/wf_bacterial_annot_pass3.cwl Branch/Commit ID: 485f0be56cea77bff62b797ae7eff422a990a92c
	scatter GATK HaplotypeCaller over intervals	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/gatk_haplotypecaller_iterator.cwl Branch/Commit ID: efbbe5ed51f6ac583e87a348785c72818a33f56e
	Non-Coding Bacterial Genes	https://github.com/ncbi/pgap.git Path: bacterial_noncoding/wf_bacterial_noncoding.cwl Branch/Commit ID: 485f0be56cea77bff62b797ae7eff422a990a92c
	Run genomic CMsearch (Rfam rRNA)	https://github.com/ncbi/pgap.git Path: bacterial_ncrna/wf_gcmsearch.cwl Branch/Commit ID: 485f0be56cea77bff62b797ae7eff422a990a92c
	Seed Search Compartments	https://github.com/ncbi/pgap.git Path: protein_alignment/wf_seed.cwl Branch/Commit ID: 485f0be56cea77bff62b797ae7eff422a990a92c
	Exome QC workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/qc_exome.cwl Branch/Commit ID: 28d1065759cbd389594ee33b41fd1103ced5436d
	cache_test_workflow.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/cache_test_workflow.cwl Branch/Commit ID: fec7a10466a26e376b14181a88734983cfb1b8cb
	1st-workflow.cwl	https://github.com/common-workflow-language/user_guide.git Path: _includes/cwl/21-1st-workflow/1st-workflow.cwl Branch/Commit ID: 1dc24a67a5dbf92f97fdd3006286167b714a8ea2