Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph get_spike_in_counts.cwl

https://github.com/CompEpigen/ChIPseq_workflows.git

Path: CWL/workflow_modules/get_spike_in_counts.cwl

Branch/Commit ID: 7361fa2a006624a3a3f5b97d060d44ca4d66402d
workflow graph list ZIP content by URL

curl will download a HTTP/HTTPS resource or file from a given URL, following any redirections.

https://github.com/stain/ro-index-paper.git

Path: code/data-gathering/workflows/zip-content-by-url.cwl

Branch/Commit ID: 322f215ffb58ca5f735f8f4f6a0cdc96cbd0e0aa
workflow graph workflow.cwl

https://github.com/dprelipcean/reana-demo-cms-h4l.git

Path: workflow/workflow.cwl

Branch/Commit ID: 238f0e5a40d6c68ac010bb911ae5c4558c6f5ede
workflow graph amplicon_metrics.cwl

https://github.com/nci-gdc/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/amplicon_metrics.cwl

Branch/Commit ID: 18affdd927cc388fab2c113dc2ec6df782af2a52
workflow graph tt_hmmsearch_wnode.cwl

https://github.com/ncbi/pgap.git

Path: task_types/tt_hmmsearch_wnode.cwl

Branch/Commit ID: 485f0be56cea77bff62b797ae7eff422a990a92c
workflow graph count-lines9-wf.cwl

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/count-lines9-wf.cwl

Branch/Commit ID: 4642316a30a95d4f3d135c18f98477886b160094
workflow graph find downloadable files in zenodo community

For a given Zenodo community, retrieve a list of all its downloadable files

https://github.com/stain/ro-index-paper.git

Path: code/data-gathering/workflows/zenodo-community-links.cwl

Branch/Commit ID: 322f215ffb58ca5f735f8f4f6a0cdc96cbd0e0aa
workflow graph trim_and_map.cwl

https://github.com/CompEpigen/ChIPseq_workflows.git

Path: CWL/workflow_modules/trim_and_map.cwl

Branch/Commit ID: 7361fa2a006624a3a3f5b97d060d44ca4d66402d
workflow graph blastp_wnode_naming

https://github.com/ncbi/pgap.git

Path: task_types/tt_blastp_wnode_naming.cwl

Branch/Commit ID: 48381989cb983567ed936fde632714933df65350
workflow graph varscan somatic workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/varscan.cwl

Branch/Commit ID: f77a920bcc73f6cfdb091eed75a149d02cd8a263