Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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gcaccess_from_list
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https://github.com/ncbi/pgap.git
Path: task_types/tt_gcaccess_from_list.cwl Branch/Commit ID: dcbbce152fbff2637f102471fb80318244492853 |
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wf_clipseqcore_se_1barcode.cwl
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https://github.com/YeoLab/eclip.git
Path: cwl/wf_clipseqcore_se_1barcode.cwl Branch/Commit ID: 7196b92e262fe5f8acee04cb0d1b6fd23e4febdc |
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Add snv and indel bam-readcount files to a vcf
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https://github.com/litd/analysis-workflows.git
Path: definitions/subworkflows/vcf_readcount_annotator.cwl Branch/Commit ID: 1a908acc8059c2381ed146c6be1668f4bf1cfa73 |
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format_rrnas_from_seq_entry
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https://github.com/ncbi/pgap.git
Path: task_types/tt_format_rrnas_from_seq_entry.cwl Branch/Commit ID: dcbbce152fbff2637f102471fb80318244492853 |
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kf_alignment_fq_input_wf.cwl
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https://github.com/kids-first/kf-alignment-workflow.git
Path: workflows/kf_alignment_fq_input_wf.cwl Branch/Commit ID: a1cd86214398947c57529677ec10f97b606b7de2 |
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wgs alignment and tumor-only variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/wgs.cwl Branch/Commit ID: fa0bf2a51b72cd0869253943b67aa8e271633945 |
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kmer_cache_retrieve
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_cache_retrieve.cwl Branch/Commit ID: dcbbce152fbff2637f102471fb80318244492853 |
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extract_readgroup_fastq_se.cwl
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https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/extract_readgroup_fastq_se.cwl Branch/Commit ID: f34d3963b33e0a379338cb3cb75b0016f012bf2c |
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Run pindel on provided region
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/pindel_region.cwl Branch/Commit ID: 04d21c33a5f2950e86db285fa0a32a6659198d8a |
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align_sort_sa
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https://github.com/ncbi/pgap.git
Path: task_types/tt_align_sort_sa.cwl Branch/Commit ID: dcbbce152fbff2637f102471fb80318244492853 |
