Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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BLAST against rRNA db
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https://github.com/ncbi/pgap.git
Path: bacterial_noncoding/wf_blastn.cwl Branch/Commit ID: 02816f0d66e36c8eeba02d211cc90e36bf1c9df5 |
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count-lines4-wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/count-lines4-wf.cwl Branch/Commit ID: 0b3846fbf866584870a0b1ce902b5574f549dfee |
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Run tRNAScan
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https://github.com/ncbi/pgap.git
Path: bacterial_trna/wf_trnascan.cwl Branch/Commit ID: f76a7f4a81ef4e60fa9a3964445162c92bf3d57c |
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count-lines4-wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/count-lines4-wf.cwl Branch/Commit ID: 4642316a30a95d4f3d135c18f98477886b160094 |
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scRNA-seq pipeline using Salmon and Alevin
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https://github.com/hubmapconsortium/salmon-rnaseq.git
Path: pipeline.cwl Branch/Commit ID: 1d99c4a59d4502305e8dfe4cf4fe3211a57d0eef |
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bam to trimmed fastqs and biscuit alignments
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bam_to_trimmed_fastq_and_biscuit_alignments.cwl Branch/Commit ID: f77a920bcc73f6cfdb091eed75a149d02cd8a263 |
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PGAP Pipeline
PGAP pipeline for external usage, powered via containers |
https://github.com/ncbi/pgap.git
Path: wf_common.cwl Branch/Commit ID: bb2f26dfe630179737ec2ff08a8614f1f47abcaf |
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1st-workflow.cwl
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https://github.com/common-workflow-language/user_guide.git
Path: _includes/cwl/22-nested-workflows/1st-workflow.cwl Branch/Commit ID: 3ee158577fd2107f4ae64b9c77b719a775936494 |
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chipseq-header.cwl
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https://github.com/datirium/workflows.git
Path: metadata/chipseq-header.cwl Branch/Commit ID: 7b9a89a171689a535b2005011e9df283cf7ad4cc |
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workflow.cwl
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https://github.com/nal-i5k/organism_onboarding.git
Path: flow_download/workflow.cwl Branch/Commit ID: f6359e34e88cbd8b8a52de86d5377294411ce965 |
