Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	scRNA-seq pipeline using Salmon and Alevin	https://github.com/hubmapconsortium/salmon-rnaseq.git Path: pipeline.cwl Branch/Commit ID: 1d99c4a59d4502305e8dfe4cf4fe3211a57d0eef
	bam to trimmed fastqs and biscuit alignments	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_to_trimmed_fastq_and_biscuit_alignments.cwl Branch/Commit ID: f77a920bcc73f6cfdb091eed75a149d02cd8a263
	PGAP Pipeline PGAP pipeline for external usage, powered via containers	https://github.com/ncbi/pgap.git Path: wf_common.cwl Branch/Commit ID: bb2f26dfe630179737ec2ff08a8614f1f47abcaf
	1st-workflow.cwl	https://github.com/common-workflow-language/user_guide.git Path: _includes/cwl/22-nested-workflows/1st-workflow.cwl Branch/Commit ID: 3ee158577fd2107f4ae64b9c77b719a775936494
	chipseq-header.cwl	https://github.com/datirium/workflows.git Path: metadata/chipseq-header.cwl Branch/Commit ID: 7b9a89a171689a535b2005011e9df283cf7ad4cc
	workflow.cwl	https://github.com/nal-i5k/organism_onboarding.git Path: flow_download/workflow.cwl Branch/Commit ID: f6359e34e88cbd8b8a52de86d5377294411ce965
	scatter-valuefrom-wf2.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/scatter-valuefrom-wf2.cwl Branch/Commit ID: 4642316a30a95d4f3d135c18f98477886b160094
	Non-Coding Bacterial Genes	https://github.com/ncbi/pgap.git Path: bacterial_noncoding/wf_bacterial_noncoding.cwl Branch/Commit ID: 02816f0d66e36c8eeba02d211cc90e36bf1c9df5
	run_workflow_234.cwl	https://github.com/ncbi/cwl-demos.git Path: outlier-hit-detection-pipeline/run_workflow_234.cwl Branch/Commit ID: 8c1da0a9846a9c06e19461dc05854260bfbb0d84
	Subworkflow that runs cnvkit in single sample mode and returns a vcf file	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/cnvkit_single_sample.cwl Branch/Commit ID: f77a920bcc73f6cfdb091eed75a149d02cd8a263