Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Detect DoCM variants
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https://github.com/apaul7/cancer-genomics-workflow.git
Path: definitions/subworkflows/docm_germline.cwl Branch/Commit ID: low-vaf |
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Alignment without BQSR
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/sequence_to_bqsr_nonhuman.cwl Branch/Commit ID: master |
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Ambarish_Kumar_SOP-GATK-SAR-CoV-2.cwl
Author: AMBARISH KUMAR er.ambarish@gmail.com & ambari73_sit@jnu.ac.in This is a proposed standard operating procedure for genomic variant detection using GATK4. It is hoped to be effective and useful for getting SARS-CoV-2 genome variants. It uses Illumina RNASEQ reads and genome sequence. |
https://github.com/mr-c/2020-covid-19-bh-viz.git
Path: Ambarish_Kumar_SOP/Ambarish_Kumar_SOP-GATK-SAR-CoV-2.cwl Branch/Commit ID: main |
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workflow-ebisearch.cwl
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https://github.com/ebi-jdispatcher/webservice-cwl.git
Path: workflows/workflow-ebisearch.cwl Branch/Commit ID: master |
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output-arrays-int-wf.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/output-arrays-int-wf.cwl Branch/Commit ID: master |
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cgpRna_workflow.cwl
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https://github.com/cancerit/cgpRna.git
Path: cwls/cgpRna_workflow.cwl Branch/Commit ID: feature/test_for_cwlviewer |
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qiime2 explore sample taxonomic composition
Taxonomic analysis from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/ |
https://github.com/bespin-workflows/16s-qiime2.git
Path: subworkflows/qiime2-08-taxonomic-analysis.cwl Branch/Commit ID: develop |
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meds-wf.cwl
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https://github.com/EiffL/metacal-pipeline.git
Path: tools/meds-wf.cwl Branch/Commit ID: master |
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orgaquant_wf.cwl
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https://github.com/AlexanderSenf/orgaquant.git
Path: orgaquant_wf.cwl Branch/Commit ID: 1.1 |
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echo.scattered.cwl
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https://github.com/NLeSC/scriptcwl.git
Path: tests/data/echo.scattered.cwl Branch/Commit ID: master |
