Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph workflow.cwl

https://github.com/nal-i5k/organism_onboarding.git

Path: flow_dispatch/workflow.cwl

Branch/Commit ID: master
workflow graph main-somatic-giab-mix.cwl

https://github.com/bcbio/bcbio_validation_workflows.git

Path: somatic-giab-mix/somatic-giab-mix-workflow/main-somatic-giab-mix.cwl

Branch/Commit ID: master
workflow graph Unaligned BAM to BQSR and VCF

https://github.com/genome/cancer-genomics-workflow.git

Path: unaligned_bam_to_bqsr/workflow_no_dup_marking.cwl

Branch/Commit ID: toil_compatibility
workflow graph germline-gpu-v4.2.1.cwl

https://github.com/NCGM-genome/WGSpipeline.git

Path: Workflows/germline-gpu-v4.2.1.cwl

Branch/Commit ID: main
workflow graph hi-c-processing-bam.cwl

https://github.com/4dn-dcic/docker-4dn-hic.git

Path: cwl/hi-c-processing-bam.cwl

Branch/Commit ID: master
workflow graph FASTQ Vector Removal

This workflow clean up vectros from fastq files

 https://github.com/ncbi/cwl-ngs-workflows-cbb.git

Path: workflows/Contamination/fastq-vector-removal.cwl

Branch/Commit ID: master
workflow graph rhapsody_targeted_1.8.cwl#SplitAndSubsample.cwl

SplitAndSubsample splits, subsamples and formats read files to be deposited in QualityFilter.

https://github.com/longbow0/cwl.git

Path: v1.8/rhapsody_targeted_1.8.cwl

Branch/Commit ID: master

Packed ID: SplitAndSubsample.cwl
workflow graph fillout_singleton_processing.cwl

https://github.com/mskcc/pluto-cwl.git

Path: cwl/fillout_singleton_processing.cwl

Branch/Commit ID: master
workflow graph duplicated_readgroup_fix.cwl

https://github.com/uc-cdis/genomel_pipelines.git

Path: genomel/cwl/workflows/utils/duplicated_readgroup_fix.cwl

Branch/Commit ID: master
workflow graph rRNA_selection.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/rRNA_selection.cwl

Branch/Commit ID: caea457