Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
|---|---|---|---|
|
|
mutect parallel workflow
|
https://github.com/litd/analysis-workflows.git
Path: definitions/subworkflows/mutect.cwl Branch/Commit ID: 0d4e517d7c1c6deb0db02d3746c8ed4db841bd57 |
|
|
|
Apply filters to VCF file
|
https://github.com/litd/analysis-workflows.git
Path: definitions/subworkflows/filter_vcf.cwl Branch/Commit ID: 0d4e517d7c1c6deb0db02d3746c8ed4db841bd57 |
|
|
|
Bacterial Annotation, pass 2, blastp-based functional annotation (first pass)
|
https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_bacterial_annot_pass2.cwl Branch/Commit ID: 4533a5e930305c674057bc4cf5dda4f39d39b5df |
|
|
|
Detect Docm variants
|
https://github.com/litd/analysis-workflows.git
Path: definitions/subworkflows/docm_cle.cwl Branch/Commit ID: 0d4e517d7c1c6deb0db02d3746c8ed4db841bd57 |
|
|
|
Apply filters to VCF file
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/filter_vcf.cwl Branch/Commit ID: 3f3b186da9bf82a5e2ae74ba27aef35a46174ebe |
|
|
|
Detect DoCM variants
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/docm_germline.cwl Branch/Commit ID: 3f3b186da9bf82a5e2ae74ba27aef35a46174ebe |
|
|
|
Detect Docm variants
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/docm_cle.cwl Branch/Commit ID: 3f3b186da9bf82a5e2ae74ba27aef35a46174ebe |
|
|
|
QIIME2 Step 2 (DADA2 option)
QIIME2 DADA2, feature summaries, phylogenetic diversity tree, taxonomic analysis and ancom |
https://github.com/bespin-workflows/16s-qiime2.git
Path: 16s-step2-dada2-paired.cwl Branch/Commit ID: b4c07a7e07ba9ce862a2be057a905d300f3c8882 |
|
|
|
mutect parallel workflow
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/mutect.cwl Branch/Commit ID: f615832615c3b41728df8e47b72ef11e37e6a9e5 |
|
|
|
bam_readcount workflow
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bam_readcount.cwl Branch/Commit ID: adcae308fdccaa1190083616118dfadb4df65dca |
