Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Add snv and indel bam-readcount files to a vcf
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/vcf_readcount_annotator.cwl Branch/Commit ID: 3f3b186da9bf82a5e2ae74ba27aef35a46174ebe |
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Execute CRISPR
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https://github.com/ncbi/pgap.git
Path: bacterial_mobile_elem/wf_bacterial_mobile_elem.cwl Branch/Commit ID: 4533a5e930305c674057bc4cf5dda4f39d39b5df |
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genomics-workspace-genome.cwl
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https://github.com/nal-i5k/organism_onboarding.git
Path: flow_genomicsWorkspace/genomics-workspace-genome.cwl Branch/Commit ID: 337527c5512d2fb7644814bbfb4a338fd45ec907 |
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genomics-workspace-cds.cwl
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https://github.com/nal-i5k/organism_onboarding.git
Path: flow_genomicsWorkspace/genomics-workspace-cds.cwl Branch/Commit ID: 337527c5512d2fb7644814bbfb4a338fd45ec907 |
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Add snv and indel bam-readcount files to a vcf
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https://github.com/litd/analysis-workflows.git
Path: definitions/subworkflows/vcf_readcount_annotator.cwl Branch/Commit ID: 0d4e517d7c1c6deb0db02d3746c8ed4db841bd57 |
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Varscan Workflow
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https://github.com/litd/analysis-workflows.git
Path: definitions/subworkflows/varscan_pre_and_post_processing.cwl Branch/Commit ID: 0d4e517d7c1c6deb0db02d3746c8ed4db841bd57 |
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Bacterial Annotation, pass 4, blastp-based functional annotation (second pass)
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https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_bacterial_annot_pass4.cwl Branch/Commit ID: 4533a5e930305c674057bc4cf5dda4f39d39b5df |
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strelka workflow
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https://github.com/litd/analysis-workflows.git
Path: definitions/subworkflows/strelka_and_post_processing.cwl Branch/Commit ID: 0d4e517d7c1c6deb0db02d3746c8ed4db841bd57 |
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pindel parallel workflow
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https://github.com/litd/analysis-workflows.git
Path: definitions/subworkflows/pindel.cwl Branch/Commit ID: 0d4e517d7c1c6deb0db02d3746c8ed4db841bd57 |
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strelka workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/strelka_and_post_processing.cwl Branch/Commit ID: 3f3b186da9bf82a5e2ae74ba27aef35a46174ebe |
