Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	wgs alignment with qc	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/alignment_wgs.cwl Branch/Commit ID: 3f3b186da9bf82a5e2ae74ba27aef35a46174ebe
	Subworkflow to allow calling different SV callers which require bam files as inputs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/single_sample_sv_callers.cwl Branch/Commit ID: f0cdc773e31e4aa116838e8aba4954c31bd3d68b
	wgs alignment with qc	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/alignment_wgs.cwl Branch/Commit ID: f0cdc773e31e4aa116838e8aba4954c31bd3d68b
	cram_to_bam workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/cram_to_bam_and_index.cwl Branch/Commit ID: 789267ce0e3fed674ea5212a562315218fcf1bfc
	trnascan_wnode and gpx_qdump combined	https://github.com/ncbi/pgap.git Path: bacterial_trna/wf_scan_and_dump.cwl Branch/Commit ID: ea8c2aea64cab2241e02f4cb60ca9ca7593dfa58
	running cellranger mkfastq and count	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/cellranger_mkfastq_and_count.cwl Branch/Commit ID: 3f3b186da9bf82a5e2ae74ba27aef35a46174ebe
	running cellranger mkfastq and count	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/cellranger_mkfastq_and_count.cwl Branch/Commit ID: 449bc7e45bb02316d040f73838ef18359e770268
	Run tRNAScan	https://github.com/ncbi/pgap.git Path: bacterial_trna/wf_trnascan.cwl Branch/Commit ID: ce433f771ebf5677c9f40858e2ae91b1a7e75d30
	BLAST against rRNA db	https://github.com/ncbi/pgap.git Path: bacterial_noncoding/wf_blastn.cwl Branch/Commit ID: 546742b523ce12f6246a52c838a51920a08dad4b
	workflow-fetch-phobius.cwl	https://github.com/ebi-wp/webservice-cwl.git Path: workflows/workflow-fetch-phobius.cwl Branch/Commit ID: b191ca3e4273b922bba6af4c1eacdaa86a5b62f4