Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph workflow.cwl

https://github.com/nal-i5k/organism_onboarding.git

Path: flow_dispatch/2working_files/workflow.cwl

Branch/Commit ID: 22c18af26fa088b2b31ebb27d38a7e81d21b6d08
workflow graph Bacterial Annotation, pass 1, genemark training, by HMMs (first pass)

https://github.com/ncbi/pgap.git

Path: bacterial_annot/wf_bacterial_annot_pass1.cwl

Branch/Commit ID: 546742b523ce12f6246a52c838a51920a08dad4b
workflow graph test_workflow.cwl

https://github.com/jniestroy/cwl_parser.git

Path: workflows/test_workflow.cwl

Branch/Commit ID: 0296ef0eb65d5e6a4e134507e770a4507fbab867
workflow graph RNA-Seq alignment and transcript/gene abundance workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/rnaseq.cwl

Branch/Commit ID: 8dc462a7d9ba1479f764682af99c69d8574cb3dc
workflow graph protein_extract

https://github.com/ncbi/pgap.git

Path: progs/protein_extract.cwl

Branch/Commit ID: 546742b523ce12f6246a52c838a51920a08dad4b
workflow graph Filter Protein Alignments I

https://github.com/ncbi/pgap.git

Path: protein_alignment/wf_align_filter.cwl

Branch/Commit ID: 546742b523ce12f6246a52c838a51920a08dad4b
workflow graph blastp_wnode_naming

https://github.com/ncbi/pgap.git

Path: task_types/tt_blastp_wnode_naming.cwl

Branch/Commit ID: 546742b523ce12f6246a52c838a51920a08dad4b
workflow graph Subworkflow to allow calling different SV callers which require bam files as inputs

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/single_sample_sv_callers.cwl

Branch/Commit ID: 3f3b186da9bf82a5e2ae74ba27aef35a46174ebe
workflow graph genomics-workspace-genome.cwl

https://github.com/NAL-i5K/Organism_Onboarding.git

Path: flow_genomicsWorkspace/genomics-workspace-genome.cwl

Branch/Commit ID: 22c18af26fa088b2b31ebb27d38a7e81d21b6d08
workflow graph Execute CRISPR

https://github.com/ncbi/pgap.git

Path: bacterial_mobile_elem/wf_bacterial_mobile_elem.cwl

Branch/Commit ID: 6da75f18faf50194faef92910ed3cae3c7f372b4