Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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bgzip and index VCF
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bgzip_and_index.cwl Branch/Commit ID: 195b4ab487c939eb32a55d9f78bc1befd100caae |
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count-lines4-wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/count-lines4-wf.cwl Branch/Commit ID: 58274ef14adbbf7e09dbf6e5170780179669078b |
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fp_filter workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/fp_filter.cwl Branch/Commit ID: 195b4ab487c939eb32a55d9f78bc1befd100caae |
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Subworkflow that runs cnvkit in single sample mode and returns a vcf file
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/cnvkit_single_sample.cwl Branch/Commit ID: 3042812447d9e8889c6118986490e9c9b9b13223 |
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process VCF workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/strelka_process_vcf.cwl Branch/Commit ID: 42c66dd24ce5026d3f717214ddb18b7b4fae93cf |
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varscan somatic workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/varscan.cwl Branch/Commit ID: 2979b565f88ceebca934611adbf3fb8cefd65a19 |
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count-lines1-wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/count-lines1-wf.cwl Branch/Commit ID: 58274ef14adbbf7e09dbf6e5170780179669078b |
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sum-wf.cwl
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https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/sum-wf.cwl Branch/Commit ID: 40fcfc01812046f012acf5153cc955ee848e69e3 |
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Unaligned BAM to BQSR
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bam_to_bqsr.cwl Branch/Commit ID: 449bc7e45bb02316d040f73838ef18359e770268 |
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env-wf3.cwl
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https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/env-wf3.cwl Branch/Commit ID: 40fcfc01812046f012acf5153cc955ee848e69e3 |
