Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Run pindel on provided region
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/pindel_region.cwl Branch/Commit ID: 049f4aeff4c4a1b8421cac9b1c1c1f0da5848315 |
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align_and_count.cwl
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https://github.com/common-workflow-lab/wdl-cwl-translator.git
Path: wdl2cwl/tests/cwl_files/align_and_count.cwl Branch/Commit ID: 0a8c54b014101112fa4a2cb5fce5c30133691cae |
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upload2ebi.workflow.cwl
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https://github.com/MG-RAST/ebi-submitter.git
Path: CWL/workflows/upload2ebi.workflow.cwl Branch/Commit ID: 98fd007564f473fd9d720e4e67ebf7bdde3ab58a |
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fp_filter workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/fp_filter.cwl Branch/Commit ID: 0d2f354af9192a56af258a7d2426c7c160f4ec1a |
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bqsr_workflow.cwl
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https://github.com/mskcc/Innovation-Pipeline.git
Path: workflows/BQSR/bqsr_workflow.cwl Branch/Commit ID: b0f226a9ac5152f3afe0d38c8cd54aa25b8b01cf |
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readme-assembly-workflow.cwl
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https://github.com/NAL-i5K/Organism_Onboarding.git
Path: flow_create_readme/readme-assembly-workflow.cwl Branch/Commit ID: add45db6f08de518e224bdc3c04094fd69cad2d2 |
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example.cwl
Example CWL workflow that uses some advanced features |
https://github.com/mskcc/pluto-cwl.git
Path: cwl/example.cwl Branch/Commit ID: 9f7b5b5f985727a2df34ae86586c296ce757004c |
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mutect parallel workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/mutect.cwl Branch/Commit ID: 0d2f354af9192a56af258a7d2426c7c160f4ec1a |
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Apply filters to VCF file
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/filter_vcf_nonhuman.cwl Branch/Commit ID: 0d2f354af9192a56af258a7d2426c7c160f4ec1a |
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tt_univec_wnode.cwl
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https://github.com/ncbi/pgap.git
Path: task_types/tt_univec_wnode.cwl Branch/Commit ID: e71779665f42fcf34601b0f65e030bb0dd47fa79 |
