Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	bgzip and index VCF	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bgzip_and_index.cwl Branch/Commit ID: 2decd55996b912feb48be5db1b052aa3274ee405
	bgzip and index VCF	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bgzip_and_index.cwl Branch/Commit ID: b9e7392e72506cadd898a6ac4db330baf6535ab6
	Subworkflow to allow calling different SV callers which require bam files as inputs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/single_sample_sv_callers.cwl Branch/Commit ID: b9e7392e72506cadd898a6ac4db330baf6535ab6
	count-lines9-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/count-lines9-wf.cwl Branch/Commit ID: 84939620c3eec1ab11369849c63237ebfa48da41
	count-lines3-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/count-lines3-wf.cwl Branch/Commit ID: 84939620c3eec1ab11369849c63237ebfa48da41
	rnaseq-header.cwl	https://github.com/datirium/workflows.git Path: metadata/rnaseq-header.cwl Branch/Commit ID: 2f0db4b3c515f91c5cfda19c78cf90d339390986
	scatter GATK HaplotypeCaller over intervals	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/gatk_haplotypecaller_iterator.cwl Branch/Commit ID: 509938802c5e42bb8084c6a5a26ab6425c60e69a
	ani_top_n	https://github.com/ncbi/pgap.git Path: task_types/tt_ani_top_n.cwl Branch/Commit ID: a432f942e325da401488be454fa0f1100d9e6189
	Per-region pindel	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pindel_cat.cwl Branch/Commit ID: bed420556091b7b8b45cf20a95e5947e1de9a416
	Add snv and indel bam-readcount files to a vcf	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/vcf_readcount_annotator.cwl Branch/Commit ID: 0b6e8fd8ead7644cf5398395b76af5cf4011686f