Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph bact_get_kmer_reference

https://github.com/ncbi-gpipe/pgap.git

Path: task_types/tt_bact_get_kmer_reference.cwl

Branch/Commit ID: be4060eec958c419c0f559da575533c8e0459ae5
workflow graph js-expr-req-wf.cwl#wf

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/js-expr-req-wf.cwl

Branch/Commit ID: a94d75178c24ce77b59403fb8276af9ad1998929

Packed ID: wf
workflow graph Varscan Workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/varscan_germline.cwl

Branch/Commit ID: 4b5970dcf08bac2598e62ffd2673e67a25004c40
workflow graph gatk-4.0.0.0-joint-calling.cwl

https://github.com/wtsi-hgi/arvados-pipelines.git

Path: cwl/workflows/gatk-4.0.0.0-joint-calling.cwl

Branch/Commit ID: 8d9c9155a49045762cbf5a1e584fc20517b8be87
workflow graph iwdr_with_nested_dirs.cwl

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/iwdr_with_nested_dirs.cwl

Branch/Commit ID: a94d75178c24ce77b59403fb8276af9ad1998929
workflow graph revsort.cwl

Reverse the lines in a document, then sort those lines.

 https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/revsort.cwl

Branch/Commit ID: a94d75178c24ce77b59403fb8276af9ad1998929
workflow graph bgzip and index VCF

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/bgzip_and_index.cwl

Branch/Commit ID: 509938802c5e42bb8084c6a5a26ab6425c60e69a
workflow graph count-lines1-wf.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/count-lines1-wf.cwl

Branch/Commit ID: 84939620c3eec1ab11369849c63237ebfa48da41
workflow graph Build Bowtie indices

Workflow runs [Bowtie](http://bowtie-bio.sourceforge.net/tutorial.shtml) v1.2.0 (12/30/2016) to build indices for reference genome provided in a single FASTA file as fasta_file input. Generated indices are saved in a folder with the name that corresponds to the input genome

 https://github.com/datirium/workflows.git

Path: workflows/bowtie-index.cwl

Branch/Commit ID: a839eb6390974089e1a558c49fc07b4c66c50767
workflow graph apolloServer-createOrganism-workflow.cwl

https://github.com/NAL-i5K/Organism_Onboarding.git

Path: apolloServer-createOrganism-workflow.cwl

Branch/Commit ID: 3aabbb0f6635bb9354ad52f616ab7cfc61848eb6