Explore Workflows
View already parsed workflows here or click here to add your own
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bam-genomecov-bigwig.cwl
creates genome coverage bigWig file from .bam file |
Path: workflows/bam-genomecov-bigwig.cwl Branch/Commit ID: v0.0.2 |
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bam2vcf.cwl
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Path: workflows/bam2vcf.cwl Branch/Commit ID: master |
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Water bodies detection based on NDWI and otsu threshold
Water bodies detection based on NDWI and otsu threshold |
Path: wrapped.cwl Branch/Commit ID: main Packed ID: water_bodies |
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steps.cwl
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Path: steps.cwl Branch/Commit ID: 4e9c15b |
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pindel parallel workflow
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Path: pindel/workflow.cwl Branch/Commit ID: toil_compatibility |
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chunking-subwf-hmmsearch.cwl
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Path: workflows/subworkflows/chunking-subwf-hmmsearch.cwl Branch/Commit ID: master |
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03-quantification.cwl
DNase-seq 03 quantification |
Path: v1.0/DNase-seq_pipeline/03-quantification.cwl Branch/Commit ID: master |
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workflow-fasta-pratt.cwl
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Path: workflows/workflow-fasta-pratt.cwl Branch/Commit ID: master |
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Whole Exome Sequencing
Whole Exome Sequence analysis using GATK best practices - Germline SNP & Indel Discovery |
Path: workflows/exomeseq.cwl Branch/Commit ID: master |
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CRAM_md5sum_checker_wrapper.cwl
This wraps the md5sum tool with a checker workflow that runs both the tool and a tool that performs verification of results |
Path: CRAM-no-header-md5sum/CRAM_md5sum_checker_wrapper.cwl Branch/Commit ID: 1.24.0 |
