Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph oxog_sub_wf.cwl

This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow!

https://github.com/svonworl/OxoG-Dockstore-Tools.git

Path: oxog_sub_wf.cwl

Branch/Commit ID: master
workflow graph rhapsody_wta_1.8.cwl#SplitAndSubsample.cwl

SplitAndSubsample splits, subsamples and formats read files to be deposited in QualityFilter.

https://github.com/longbow0/cwl.git

Path: v1.8/rhapsody_wta_1.8.cwl

Branch/Commit ID: master

Packed ID: SplitAndSubsample.cwl
workflow graph zip_and_index_vcf.cwl

This is a very simple workflow of two steps. It will zip an input VCF file and then index it. The zipped file and the index file will be in the workflow output.

https://github.com/svonworl/OxoG-Dockstore-Tools.git

Path: zip_and_index_vcf.cwl

Branch/Commit ID: develop
workflow graph Per-chromosome pindel

https://github.com/hamid58b/cancer-genomics-workflow.git

Path: pindel/pindel_cat.cwl

Branch/Commit ID: master
workflow graph wf.cwl#main

https://github.com/damonge/md_share.git

Path: wf.cwl

Branch/Commit ID: master

Packed ID: main
workflow graph pcr-bottleneck-coef.cwl

ChIP-seq - map - PCR Bottleneck Coefficients

 https://github.com/Duke-GCB/GGR-cwl.git

Path: v1.0/map/pcr-bottleneck-coef.cwl

Branch/Commit ID: master
workflow graph chksum_for_a_corrupted_fastq_file.cwl

https://github.com/cancerit/workflow-seq-import.git

Path: cwls/chksum_for_a_corrupted_fastq_file.cwl

Branch/Commit ID: 0.5.0
workflow graph EMG pipeline v3.0 (single end version)

https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git

Path: workflows/emg-pipeline-v3.cwl

Branch/Commit ID: 5833078
workflow graph run_workflow_234.cwl

https://github.com/ncbi/cwl-demos.git

Path: outlier-hit-detection-pipeline/run_workflow_234.cwl

Branch/Commit ID: master
workflow graph Filter single sample sv vcf from paired read callers(Manta/Smoove)

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/sv_paired_read_caller_filter.cwl

Branch/Commit ID: master