Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	bwa_index	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/cwl/abstract_operations/subworkflows/bwa_index.cwl Branch/Commit ID: f4c51a054b1ec51d07d89c6a8218e610653675f3
	bwa_mem	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/cwl/abstract_operations/subworkflows/bwa_mem.cwl Branch/Commit ID: f4c51a054b1ec51d07d89c6a8218e610653675f3
	Detect DoCM variants	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/docm_germline.cwl Branch/Commit ID: 0d2f354af9192a56af258a7d2426c7c160f4ec1a
	tt_kmer_compare_wnode Pairwise comparison	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_compare_wnode.cwl Branch/Commit ID: 91181df8d9ef8eed9d8f40db707b9a4376fecaf5
	hisat2-stringtie_wf_pe.cwl	https://github.com/pitagora-network/pitagora-cwl.git Path: workflows/hisat2-stringtie/paired_end/hisat2-stringtie_wf_pe.cwl Branch/Commit ID: 4e84905f265e1db212c406d34ae4db2bf565e856
	cnv_manta CNV Manta calling	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/cwl/subworkflows/cnv_manta.cwl Branch/Commit ID: 93fbc4e51770d953fc44104a7b09436f75719470
	strelka workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/strelka_and_post_processing.cwl Branch/Commit ID: d297528e53b6c1ecb69b1ab27b8e03323b4463ad
	bam_filtering BAM filtering	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/cwl/subworkflows/bam_filtering.cwl Branch/Commit ID: 93fbc4e51770d953fc44104a7b09436f75719470
	Varscan Workflow	https://github.com/apaul7/cancer-genomics-workflow.git Path: definitions/subworkflows/varscan_germline.cwl Branch/Commit ID: bfcb5ffbea3d00a38cc03595d41e53ea976d599d
	kmer_cache_retrieve	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_cache_retrieve.cwl Branch/Commit ID: 5461e63dc4714bb81e1c9f58e436c8465107a199