Explore Workflows
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| Graph | Name | Retrieved From | View |
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bacterial_orthology_cond
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https://github.com/ncbi/pgap.git
Path: bacterial_orthology/wf_bacterial_orthology_conditional.cwl Branch/Commit ID: c00944bae1a9d0f726f271786dae5454aa36f6e1 |
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trnascan_wnode and gpx_qdump combined
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https://github.com/ncbi/pgap.git
Path: bacterial_trna/wf_scan_and_dump.cwl Branch/Commit ID: c00944bae1a9d0f726f271786dae5454aa36f6e1 |
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bacterial_kmer
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https://github.com/ncbi/pgap.git
Path: bacterial_kmer/wf_bacterial_kmer.cwl Branch/Commit ID: a3affd1b9e3e16f0644a25fee1a7b87b99df57b0 |
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Run genomic CMsearch
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https://github.com/ncbi/pgap.git
Path: bacterial_noncoding/wf_gcmsearch.cwl Branch/Commit ID: c00944bae1a9d0f726f271786dae5454aa36f6e1 |
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Run genomic CMsearch (Rfam rRNA)
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https://github.com/ncbi/pgap.git
Path: bacterial_ncrna/wf_gcmsearch.cwl Branch/Commit ID: c00944bae1a9d0f726f271786dae5454aa36f6e1 |
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Bacterial Annotation, pass 2, blastp-based functional annotation (first pass)
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https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_bacterial_annot_pass2.cwl Branch/Commit ID: a3affd1b9e3e16f0644a25fee1a7b87b99df57b0 |
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Bacterial Annotation, pass 1, genemark training, by HMMs (first pass)
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https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_bacterial_annot_pass1.cwl Branch/Commit ID: a3affd1b9e3e16f0644a25fee1a7b87b99df57b0 |
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Non-Coding Bacterial Genes
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https://github.com/ncbi/pgap.git
Path: bacterial_noncoding/wf_bacterial_noncoding.cwl Branch/Commit ID: f225cd99b0e0a5043dd102f8b33a6139fefe9ea4 |
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tt_univec_wnode.cwl
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https://github.com/ncbi/pgap.git
Path: task_types/tt_univec_wnode.cwl Branch/Commit ID: 205f4ceb47ba7537a6923d2dfb03668317c2fd89 |
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taxonomy_check_16S
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https://github.com/ncbi/pgap.git
Path: task_types/tt_taxonomy_check_16S.cwl Branch/Commit ID: 205f4ceb47ba7537a6923d2dfb03668317c2fd89 |
