Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Create Genomic Collection for Bacterial Pipeline, ASN.1 input	https://github.com/ncbi/pgap.git Path: genomic_source/wf_genomic_source_asn.cwl Branch/Commit ID: 669166450aba26f3560c15960eeebdd0313a7f84
	sec-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/sec-wf.cwl Branch/Commit ID: 5ae5798f1c0c8d2178986b77cfd74edff510877a
	exome alignment with qc, no bqsr, no verify_bam_id	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/alignment_exome_mouse.cwl Branch/Commit ID: cc3e7f1ccfdc7101c22bf88792608504eea7d53a
	black-diamond-workflow.cwl	https://github.com/ryantanaka/cwl-vs-dax-example.git Path: black-diamond-workflow/cwl/black-diamond-workflow.cwl Branch/Commit ID: ac0e987b4d3434d7fa3204307eeb3902bc6ef5ce
	Bacterial Annotation, pass 3, structural annotation, functional annotation: ab initio GeneMark, by WP, by HMM (second pass)	https://github.com/ncbi/pgap.git Path: bacterial_annot/wf_bacterial_annot_pass3.cwl Branch/Commit ID: b560e3abadfb150a0013376d7a189df066ab56f9
	count-lines9-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/count-lines9-wf.cwl Branch/Commit ID: a3d565bf8e630101d25d31804cfbceb0a0ba28de
	blastp_wnode_naming	https://github.com/ncbi/pgap.git Path: task_types/tt_blastp_wnode_naming.cwl Branch/Commit ID: 5331b0836aa7c451d759ef39dc2062000ac21a47
	hmmsearch_wnode and gpx_qdump combined workflow to apply scatter/gather	https://github.com/ncbi/pgap.git Path: task_types/tt_hmmsearch_wnode_plus_qdump.cwl Branch/Commit ID: f5a467a21b8f69aef5666fb7bbf35efd98c0cbea
	basename-fields-test.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/basename-fields-test.cwl Branch/Commit ID: a3d565bf8e630101d25d31804cfbceb0a0ba28de
	strelka workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/strelka_and_post_processing.cwl Branch/Commit ID: 2e298960837739717ec2928a99c5d811183012e6