Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph download_gtf.cwl

https://github.com/yyoshiaki/VIRTUS2.git

Path: workflow/download_gtf.cwl

Branch/Commit ID: 96ccb37e04af37474771526cf0d85d3ded2005f7
workflow graph wf_get_peaks_se.cwl

https://github.com/YeoLab/eclip.git

Path: cwl/wf_get_peaks_se.cwl

Branch/Commit ID: c0fffc4979a92371dc0667a03e3d957bf7f77600
workflow graph wf_get_peaks_scatter_se.cwl

The \"main\" workflow. Takes fastq files generated using the seCLIP protocol (https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5991800/) and outputs candidate RBP binding regions (peaks). runs: wf_get_peaks_se.cwl through scatter across multiple samples.

https://github.com/YeoLab/eclip.git

Path: cwl/wf_get_peaks_scatter_se.cwl

Branch/Commit ID: c0fffc4979a92371dc0667a03e3d957bf7f77600
workflow graph wf_get_peaks_scatter_se_nostats.cwl

The \"main\" workflow. Takes fastq files generated using the seCLIP protocol (https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5991800/) and outputs candidate RBP binding regions (peaks). runs: wf_get_peaks_se.cwl through scatter across multiple samples.

https://github.com/yeolab/eclip.git

Path: cwl/wf_get_peaks_scatter_se_nostats.cwl

Branch/Commit ID: 49a9bcda10de8f55fab2481f424eb9cdf2e5b256
workflow graph wf_get_peaks_nostats_se.cwl

https://github.com/yeolab/eclip.git

Path: cwl/wf_get_peaks_nostats_se.cwl

Branch/Commit ID: 49a9bcda10de8f55fab2481f424eb9cdf2e5b256
workflow graph wf_clipseqcore_nostats_se_1barcode.cwl

https://github.com/yeolab/eclip.git

Path: cwl/wf_clipseqcore_nostats_se_1barcode.cwl

Branch/Commit ID: 49a9bcda10de8f55fab2481f424eb9cdf2e5b256
workflow graph alignment_bwa_mem_prod.cwl

https://github.com/uc-cdis/genomel_pipelines.git

Path: genomel/cwl/workflows/harmonization/alignment_bwa_mem_prod.cwl

Branch/Commit ID: 13c106834d6c9031de08496faeff521740a0c95f
workflow graph alignment_novoalign.cwl

https://github.com/uc-cdis/genomel_pipelines.git

Path: genomel/cwl/workflows/harmonization/alignment_novoalign.cwl

Branch/Commit ID: 8b8c058848e4efe8b12e4070efec046835a19508
workflow graph l1b_workflow.cwl

https://github.com/unity-sds/sounder-sips-application.git

Path: cwl/l1b_workflow.cwl

Branch/Commit ID: a1e2cf4b07504820129cd8ed7554134b4534f79d
workflow graph genotypegvcfs.cwl

https://github.com/uc-cdis/genomel_pipelines.git

Path: genomel/cwl/workflows/variant_calling/genotypegvcfs.cwl

Branch/Commit ID: 342c8a39d5823bbcf298d2f807ec235910e5f412