Explore Workflows
View already parsed workflows here or click here to add your own
Graph | Name | Retrieved From | View |
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Detect Docm variants
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![]() Path: definitions/subworkflows/docm_cle.cwl Branch/Commit ID: 42c66dd24ce5026d3f717214ddb18b7b4fae93cf |
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default-wf5.cwl
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![]() Path: tests/wf/default-wf5.cwl Branch/Commit ID: 5ae5798f1c0c8d2178986b77cfd74edff510877a |
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Build Bowtie indices
Workflow runs [Bowtie](http://bowtie-bio.sourceforge.net/tutorial.shtml) v1.2.0 (12/30/2016) to build indices for reference genome provided in a single FASTA file as fasta_file input. Generated indices are saved in a folder with the name that corresponds to the input genome |
![]() Path: workflows/bowtie-index.cwl Branch/Commit ID: dda6e8b5ada3f106a2b3bfcc1b151eccf9977726 |
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sec-wf.cwl
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![]() Path: tests/wf/sec-wf.cwl Branch/Commit ID: c7c379948c02ba8f048d157f06eb903b1bda9894 |
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fastqSE2bam.cwl
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![]() Path: Workflows/fastqSE2bam.cwl Branch/Commit ID: 90742a252865d50bec7b0b167ccecf6f1424ea28 |
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Hello World
Outputs a message using echo |
![]() Path: tests/wf/hello-workflow.cwl Branch/Commit ID: 445f6b3a214f0c48317b25f7af278ae919ce5403 |
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foreign_screening.cwl
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![]() Path: vecscreen/foreign_screening.cwl Branch/Commit ID: e9cc6de8cd1e00345969c646e5e6f27d7d10420f |
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Build Bowtie indices
Workflow runs [Bowtie](http://bowtie-bio.sourceforge.net/tutorial.shtml) v1.2.0 (12/30/2016) to build indices for reference genome provided in a single FASTA file as fasta_file input. Generated indices are saved in a folder with the name that corresponds to the input genome |
![]() Path: workflows/bowtie-index.cwl Branch/Commit ID: a68821bf3a9ceadc3b2ffbb535d601d9a645b377 |
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hmmsearch_wnode and gpx_qdump combined workflow to apply scatter/gather
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![]() Path: task_types/tt_hmmsearch_wnode_plus_qdump.cwl Branch/Commit ID: b560e3abadfb150a0013376d7a189df066ab56f9 |
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genomics-workspace-protein.cwl
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![]() Path: flow_genomicsWorkspace/genomics-workspace-protein.cwl Branch/Commit ID: 68c9a1724f9fdb8e5e38a34c54414699a1e18407 |