Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	workflow.cwl	https://github.com/nal-i5k/organism_onboarding.git Path: flow_download/workflow.cwl Branch/Commit ID: 68c9a1724f9fdb8e5e38a34c54414699a1e18407
	running cellranger mkfastq and count	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/cellranger_mkfastq_and_count.cwl Branch/Commit ID: 3042812447d9e8889c6118986490e9c9b9b13223
	cluster_blastp_wnode and gpx_qdump combined	https://github.com/ncbi/pgap.git Path: task_types/tt_cluster_and_qdump.cwl Branch/Commit ID: 669166450aba26f3560c15960eeebdd0313a7f84
	Run genomic CMsearch (Rfam rRNA)	https://github.com/ncbi/pgap.git Path: bacterial_ncrna/wf_gcmsearch.cwl Branch/Commit ID: 4533a5e930305c674057bc4cf5dda4f39d39b5df
	workflow.cwl	https://github.com/inab/Wetlab2Variations.git Path: cwl-workflows/demonstrator/workflow.cwl Branch/Commit ID: 5e109429c3b59a8e79cc18f614c4218dbc4fc9ea
	bams2gvcf.woBQSR_female.cwl	https://github.com/ddbj/human-reseq.git Path: Workflows/bams2gvcf.woBQSR_female.cwl Branch/Commit ID: 90742a252865d50bec7b0b167ccecf6f1424ea28
	PGAP Pipeline, simple user input, PGAPX-134 PGAP pipeline for external usage, powered via containers, simple user input: (FASTA + yaml only, no template)	https://github.com/ncbi/pgap.git Path: pgap.cwl Branch/Commit ID: b560e3abadfb150a0013376d7a189df066ab56f9
	metrics-flow.cwl Run metrics workflow	https://github.com/Sentieon/Sentieon-cwl.git Path: stage/metrics-flow.cwl Branch/Commit ID: d20382adfe7285cb517a25d95d2bcb7586546e23
	wf_cellranger.cwl	https://github.com/byee4/cellranger.git Path: cwl/wf_cellranger.cwl Branch/Commit ID: 4401abf7c5e6e4e5afdf5942cb2c603b63e3ee19
	Subworkflow to allow calling different SV callers which require bam files as inputs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/single_sample_sv_callers.cwl Branch/Commit ID: 3042812447d9e8889c6118986490e9c9b9b13223