Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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snapanalysis_setup_and_analyze.cwl
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https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git
Path: steps/snapanalysis_setup_and_analyze.cwl Branch/Commit ID: 904fbfbbee5f867a6b642cb225c02386549c49f6 |
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cgpRna_workflow.cwl
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https://github.com/cancerit/cgpRna.git
Path: cwls/cgpRna_workflow.cwl Branch/Commit ID: 5b104afe018fc203e41e3867ed455315ac1c7391 |
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Single-Cell Preprocessing Pipeline
Devel version of Single-Cell Preprocessing Pipeline =================================================== |
https://github.com/datirium/workflows.git
Path: workflows/single-cell-preprocess.cwl Branch/Commit ID: e0a30aa1ad516dd2ec0e9ce006428964b840daf4 |
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04-quantification-pe-unstranded.cwl
RNA-seq 04 quantification |
https://github.com/Duke-GCB/GGR-cwl.git
Path: v1.0/RNA-seq_pipeline/04-quantification-pe-unstranded.cwl Branch/Commit ID: ebd63f705d0fde7290e42c8300d5420c25cfbfe3 |
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Run pindel on provided region
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/pindel_region.cwl Branch/Commit ID: 3034168d652bfa930ba09af20e473a4564a8010d |
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bams2gvcf.woBQSR_male.multisamples.cwl
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https://github.com/ddbj/human-reseq.git
Path: Workflows/bams2gvcf.woBQSR_male.multisamples.cwl Branch/Commit ID: a1c9cd63c80122d6a831059cdb73ec9a9455af6f |
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exome alignment and somatic variant detection for cle purpose
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/somatic_exome_cle.cwl Branch/Commit ID: 04d21c33a5f2950e86db285fa0a32a6659198d8a |
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workflow.cwl
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https://github.com/mr-c/scalability-reproducibility-chapter.git
Path: CWL/workflow.cwl Branch/Commit ID: 7795938377fba40e4bc5ac4735868d2c0e10bf8c |
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downsample unaligned BAM and align
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https://github.com/genome/cancer-genomics-workflow.git
Path: unaligned_bam_to_bqsr/downsample_workflow.cwl Branch/Commit ID: d1ee6a2a323cee7e4af00c7e0b926c2192038e1d |
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ani_top_n
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https://github.com/ncbi/pgap.git
Path: task_types/tt_ani_top_n.cwl Branch/Commit ID: 5331b0836aa7c451d759ef39dc2062000ac21a47 |
