Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Single-Cell RNA-Seq Differential Expression Analysis Single-Cell RNA-Seq Differential Expression Analysis Identifies differentially expressed genes between any two groups of cells, optionally aggregating gene expression data from single-cell to pseudobulk form.	https://github.com/datirium/workflows.git Path: workflows/sc-rna-de-pseudobulk.cwl Branch/Commit ID: 93b844a80f4008cc973ea9b5efedaff32a343895
	group-isoforms-batch.cwl Workflow runs group-isoforms.cwl tool using scatter for isoforms_file input. genes_filename and common_tss_filename inputs are ignored.	https://github.com/datirium/workflows.git Path: tools/group-isoforms-batch.cwl Branch/Commit ID: 4f48ee6f8665a34cdf96e89c012ee807f80c7a3d
	scatter-wf2.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/scatter-wf2.cwl Branch/Commit ID: 4700fbee9a5a3271eef8bc9ee595619d0720431b
	Unaligned to aligned BAM	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/align.cwl Branch/Commit ID: 293dc7b83639d21a56efff2baf9dfe4e97b9b806
	directory.cwl Inspect provided directory and return filenames. Generate a new directory and return it (including content).	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/directory.cwl Branch/Commit ID: aec33fcfa3459a90cbba8c88ebb991be94d21429
	bam_readcount workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_readcount.cwl Branch/Commit ID: 6b365b79675b2aabfb8d5829bb8df0a6e986b037
	Detect DoCM variants	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/docm_germline.cwl Branch/Commit ID: efbbe5ed51f6ac583e87a348785c72818a33f56e
	allele-process-strain.cwl	https://github.com/datirium/workflows.git Path: subworkflows/allele-process-strain.cwl Branch/Commit ID: 09c08f858e91c4cfd387067f07445722ac7e18aa
	count-lines6-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/count-lines6-wf.cwl Branch/Commit ID: 8010fd2bf1e7090ba6df6ca8c84bbb96e2272d32
	AltAnalyze ICGS AltAnalyze ICGS ===============	https://github.com/datirium/workflows.git Path: workflows/altanalyze-icgs.cwl Branch/Commit ID: 36fd18f11e939d3908b1eca8d2939402f7a99b0f