Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	foreign_screening.cwl	https://github.com/ncbi/pgap.git Path: vecscreen/foreign_screening.cwl Branch/Commit ID: 7319ccfd2108929588bdc266d9df198629dfaa65
	align_merge_sas	https://github.com/ncbi/pgap.git Path: task_types/tt_align_merge_sas.cwl Branch/Commit ID: 5331b0836aa7c451d759ef39dc2062000ac21a47
	Bacterial Annotation, pass 2, blastp-based functional annotation (first pass)	https://github.com/ncbi/pgap.git Path: bacterial_annot/wf_bacterial_annot_pass2.cwl Branch/Commit ID: 49732e54e2fe2eafd2f82df3c482c73e642f6d64
	extract_gencoll_ids	https://github.com/ncbi/pgap.git Path: task_types/tt_extract_gencoll_ids.cwl Branch/Commit ID: 3897218b16b30a933beecd60a98a300d677207d8
	Compute library complexity This workflow compute library complexity	https://github.com/ncbi/cwl-ngs-workflows-cbb.git Path: workflows/File-formats/bedtools-bam-pbc.cwl Branch/Commit ID: f9447c1ac522e17531097c93a169a1a31453e874
	magicblast-alignment-pe This workflow aligns the fastq files using magicblast for paired-end samples	https://github.com/ncbi/cwl-ngs-workflows-cbb.git Path: workflows/Alignments/magicblast-alignment.cwl Branch/Commit ID: 11f70a71cb68b3960c2d410ba1fdcd3b8a7e1419
	Creates FASTA file from BED coordinates This workflow creates FASTA file from BED coordinates	https://github.com/ncbi/cwl-ngs-workflows-cbb.git Path: workflows/File-formats/fasta-from-bed.cwl Branch/Commit ID: f37e1346f1d48fe9f2b9282e37997a2e3ffed7e2
	BLASTP, parse, dump FASTA	https://github.com/ncbi/cwl-demos.git Path: blast-pipelines/simple_three_step.cwl Branch/Commit ID: 0d2a5b145fce0e8424b7cebc4d2881cc30e40ca4
	genomics-workspace-cds.cwl	https://github.com/nal-i5k/organism_onboarding.git Path: flow_genomicsWorkspace/genomics-workspace-cds.cwl Branch/Commit ID: b1e1b906fcfb2c0fad8811fb8ab03009282c1d19
	facets	https://github.com/mskcc/roslin-variant.git Path: setup/cwl/facets.cwl Branch/Commit ID: 72353a747f45ffe35863c3b6c70b28a676a97643