Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	count-lines1-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/count-lines1-wf.cwl Branch/Commit ID: 6c86caa0571fd186d90a6600e0bb405596d4a5e0
	merge and annotate svs with population allele freq and vep	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/merge_svs.cwl Branch/Commit ID: 60edaf6f57eaaf02cda1a3d8cb9a825aa64a43e2
	kmer_ref_compare_wnode	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_ref_compare_wnode.cwl Branch/Commit ID: 205f4ceb47ba7537a6923d2dfb03668317c2fd89
	env-wf3.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/env-wf3.cwl Branch/Commit ID: 26870e38cec81af880cd3e4789ae6cee8fc27020
	step-valuefrom3-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/step-valuefrom3-wf.cwl Branch/Commit ID: 09323506da219ba3ddb5313bd83022b52cac9adc
	Bacterial Annotation, pass 4, blastp-based functional annotation (second pass)	https://github.com/ncbi/pgap.git Path: bacterial_annot/wf_bacterial_annot_pass4.cwl Branch/Commit ID: 343cb00abda2bc06daf9a32e1386c835f324ae6e
	Unaligned to aligned BAM	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/align.cwl Branch/Commit ID: 93656ed6582073e434eab168c610625a835dce37
	rna_prediction-sub-wf.cwl	https://github.com/EBI-Metagenomics/pipeline-v5.git Path: workflows/subworkflows/rna_prediction-sub-wf.cwl Branch/Commit ID: 6ec8d032feb120eb0eebf9a0c01d48deabf42eea
	bam_readcount workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_readcount.cwl Branch/Commit ID: 2f65fc96207a71b1cda4e246f808bed056608cd0
	Feature expression merge - combines feature expression from several experiments Feature expression merge - combines feature expression from several experiments ========================================================================= Workflows merges RPKM (by default) gene expression from several experiments based on the values from GeneId, Chrom, TxStart, TxEnd and Strand columns (by default). Reported unique columns are renamed based on the experiments names.	https://github.com/datirium/workflows.git Path: workflows/feature-merge.cwl Branch/Commit ID: 93b844a80f4008cc973ea9b5efedaff32a343895